Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0739 |
Symbol | asnB |
ID | 6487004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 743336 |
End bp | 745000 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642736151 |
Product | asparagine synthetase B |
Protein accession | YP_002039917 |
Protein GI | 194444808 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000246086 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 0.581631 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTTCTA TTTTCGGCGT ATTCGATATC AAAACAGATG CAGCGGAACT GCGTAAAAAA GCCCTTGAAC TGTCACGCCT GATGCGCCAT CGCGGCCCGG ACTGGTCCGG CATCTACGCT TGCGATAACG CGATTCTCGC ACATGAACGT TTGTCGATTG TTGATGTTAA CGCCGGCGCC CAGCCCCTGT ATAACGCCAG AAAAACCCAC GTGCTGGCGG TGAACGGTGA AATTTATAAC CATCAAACGT TACGCGCGGA GTATGGCGAT CGTTACGCGT TCCAGACAGG CTCCGACTGC GAAGTTATTC TCGCGCTATA TCAGGAAAAA GGGCCGGATT TCCTTGACGA TTTACAGGGG ATGTTCGCCT TCGCCCTGTA TGACAGCGAA AAAGACGCTT ATCTGATTGG TCGTGACCAT ATCGGTATTA TTCCGCTCTA CATGGGCTAT GACGAATTCG GCAACTTCTA CGTAGCGTCA GAAATGAAAG CGCTGACCCC GGTCTGCCGC ACCATTAAAG AGTTCCCGGC GGGCAGCTAC CTGTGGAGCA AAGACGGCGA AATTCGTCAG TACTATCAGC GCGACTGGTT CGATTACGAT GCGGTAAAAG ACAACGTCAC CGACAAAAAC GCGCTGCGCC AGGCGCTGGA AGAATCCGTG AAAAGCCACC TGATGTCCGA CGTGCCCTAT GGCGTGCTGC TCTCCGGCGG TCTGGACTCG TCGGTTATTT CGGCAATCAC CAAAAAATTC GCCGCCCGTC GCGTCGAAGA TCAGGAGCGC TCCGAAGCCT GGTGGCCACA GTTGCACTCT TTTGCGGTCG GTCTGGAAGG TTCGCCTGAC CTGAAGGCGG CCCAGGAAGT GGCTAACCAC CTCGGCACCG TGCACCATGA AATTCACTTC ACCGTGCAGG AAGGCCTTGA TGCCATTCGT GATGTTATCT ATCACATTGA AACCTATGAC GTGACCACTA TCCGCGCCTC AACGCCAATG TATCTGATGT CGCGTAAGAT CAAAGCGATG GGCATCAAAA TGGTGCTCTC CGGCGAAGGT TCCGATGAGG TGTTTGGCGG CTACCTGTAC TTCCATAAAG CGCCGAACGC CAAAGAGTTA CATGAAGAGA CGGTCCGTAA GCTACAGGCG CTGCATATGT ATGACTGCGC CCGCGCCAAC AAAGCGATGT CCGCCTGGGG CGTGGAAGCG CGCGTACCGT TCCTGGATAA AAAATTCCTC GACGTGGCGA TGCGTATCAA CCCACAGGAT AAAATGTGCG GCAACGGCAA GATGGAAAAA CACGTGCTGC GCGAGTGCTT CGAGTCTTAT CTGCCAGCAA GCGTCGCGTG GCGTCAGAAA GAGCAGTTCT CTGACGGCGT AGGCTACAGC TGGATCGATA CGCTGAAAGA AGTGGCGGCG AAACAAATTT CCGATCAACA ACTGGAAACC GCCCGCTTCC GCTTTCCATA CAACACGCCG TCGTCTAAAG AGGCGTACTT GTACCGGGAA ATTTTTGAAG AATTGTTCCC GGTGCCGAGC GCGGCGGAAT GCGTACCCGG CGGCCCGTCC GTGGCCTGTT CTTCCGCCAA AGCCATTGAG TGGGATGAAG CATTCAAAAC GATGGATGAC CCGTCAGGCC GCGCGGTCGG CGTGCATCAG TCGGCGTACC AGTAA
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Protein sequence | MCSIFGVFDI KTDAAELRKK ALELSRLMRH RGPDWSGIYA CDNAILAHER LSIVDVNAGA QPLYNARKTH VLAVNGEIYN HQTLRAEYGD RYAFQTGSDC EVILALYQEK GPDFLDDLQG MFAFALYDSE KDAYLIGRDH IGIIPLYMGY DEFGNFYVAS EMKALTPVCR TIKEFPAGSY LWSKDGEIRQ YYQRDWFDYD AVKDNVTDKN ALRQALEESV KSHLMSDVPY GVLLSGGLDS SVISAITKKF AARRVEDQER SEAWWPQLHS FAVGLEGSPD LKAAQEVANH LGTVHHEIHF TVQEGLDAIR DVIYHIETYD VTTIRASTPM YLMSRKIKAM GIKMVLSGEG SDEVFGGYLY FHKAPNAKEL HEETVRKLQA LHMYDCARAN KAMSAWGVEA RVPFLDKKFL DVAMRINPQD KMCGNGKMEK HVLRECFESY LPASVAWRQK EQFSDGVGYS WIDTLKEVAA KQISDQQLET ARFRFPYNTP SSKEAYLYRE IFEELFPVPS AAECVPGGPS VACSSAKAIE WDEAFKTMDD PSGRAVGVHQ SAYQ
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