Gene SNSL254_A0726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0726 
SymbolcorC 
ID6482528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp736127 
End bp737005 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content52% 
IMG OID642736138 
Productmagnesium and cobalt efflux protein CorC 
Protein accessionYP_002039911 
Protein GI194443019 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4535] Putative Mg2+ and Co2+ transporter CorC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value0.93581 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG ACAATTCACA CAGTAGTGAC ACAGTAAACA GTAAAAAGGG ATTTTTTTCC 
CTGCTACTCA GCCAGCTTTT CCACGGTGAA CCTAAAAACC GCGATGAGTT GCTGGCGCTG
ATCCGTGATT CCGGGCAGAA CGAGCTTATC GATGAAGATA CGCGCGATAT GCTCGAAGGC
GTAATGGACA TCGCCGACCA GCGCGTTCGC GATATTATGA TCCCGCGCTC CCAGATGATT
ACCCTGAAAC GCAACCAGAC GCTGGACGAA TGTCTCGATG TTATCATCGA GTCCGCCCAC
TCGCGTTTTC CGGTGATCAG CGAAGATAAA GATCACATTG AAGGGATTCT GATGGCCAAA
GATTTGCTGC CGTTTATGCG CAGCGATGCC GAAGCCTTCA GCATGGACAA AGTGTTACGC
ACCGCGGTTG TCGTACCGGA AAGCAAACGG GTTGACCGTA TGCTCAAGGA ATTCCGCTCC
CAGCGCTACC ATATGGCCAT CGTTATCGAT GAGTTTGGCG GCGTTTCCGG CCTTGTGACT
ATCGAAGACA TCCTCGAACT GATTGTCGGT GAAATTGAAG ATGAGTATGA CGAAGAAGAC
GATATCGACT TCCGTCAGCT TAGCCGCCAT ACCTGGACGA TTCGCGCGCT GGCGTCGATT
GAAGACTTCA ATGACGCTTT CGGCACCCAC TTCAGCGATG AAGAGGTCGA TACCATCGGC
GGGCTGGTGA TGCAGGCGTT CGGCCATTTA CCGGCCCGCG GCGAAACCAT TGACATTGAT
GGTTACCAGT TCAAAGTGGC GATGGCCGAT AGTCGTCGTA TTATTCAGGT GCATGTCAGG
ATCCCGGATG ACTCGCCCCA GCCAAAACTG GACGAATAA
 
Protein sequence
MSDDNSHSSD TVNSKKGFFS LLLSQLFHGE PKNRDELLAL IRDSGQNELI DEDTRDMLEG 
VMDIADQRVR DIMIPRSQMI TLKRNQTLDE CLDVIIESAH SRFPVISEDK DHIEGILMAK
DLLPFMRSDA EAFSMDKVLR TAVVVPESKR VDRMLKEFRS QRYHMAIVID EFGGVSGLVT
IEDILELIVG EIEDEYDEED DIDFRQLSRH TWTIRALASI EDFNDAFGTH FSDEEVDTIG
GLVMQAFGHL PARGETIDID GYQFKVAMAD SRRIIQVHVR IPDDSPQPKL DE