| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0725 |
|---|
| Symbol | lnt |
|---|
| ID | 6484170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 734569 |
|---|
| End bp | 736158 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642736137 |
|---|
| Product | apolipoprotein N-acyltransferase |
|---|
| Protein accession | YP_002039910 |
|---|
| Protein GI | 194442405 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0815] Apolipoprotein N-acyltransferase |
|---|
| TIGRFAM ID | [TIGR00546] apolipoprotein N-acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 0.84443 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCGCC CCAGCCAAAA CTGGACGAAT AACAGCAATA GTGGACTAAA AATGGCATTT
GCCTCGTTAA TTGAACGCCA GCGTATTCGC CTGCTGCTGG CGTTATTATT CGGCGCCTGC
GGAACACTGG CTTTCTCTCC GTATGACGTC TGGCCCGCAG CGATAGTGTC GCTTATCGGG
CTGCAGGCCT TAACGTTCAA TCGCCGCCCG CTCCAGTCTG CCGCCATCGG CTATTGCTGG
GGACTCGGAC TTTTCGGTAG CGGGATTAAC TGGGTTTATG TCAGTATCGC GCAATTTGGC
GGCATGCCGG GCCCGGTTAA CGTTTTTCTG GTGGTGCTGC TTGCAGCTTA TCTCTCGCTG
TATACCGGAC TGTTTGCCGG GATTTTGTCG CGCCTGTGGC CAAAAACCAA CTGGCTGCGC
GTCGCTATCG CCGCGCCTGC AGTATGGCAA ATCACCGAAT TTTTACGCGG CTGGGTGCTG
ACCGGCTTCC CCTGGCTGCA ATTTGGCTAT AGTCAGGTCG ACGGCCCGCT AAAAGGACTG
GCGCCGGTAA TGGGCGTCGA AGCGATCAAC TTCCTGCTGA TGATGGTCAG TGGCCTGTTA
GCGCTGGCAC TGGCGACGCG GAACTGGCGT CCGCTGGCTG TCGCCGTGAT TCTGTTTGCT
TTGCCCTTTC CGCTACGTTA TATCCAGTGG TTTACGCTGG AACCGGCCAA AGCGACCCAG
GTATCGCTGG TGCAGGGCGA TATTCCGCAG TCGCTGAAGT GGGACGAAAA CCAGCTACTG
AATACGCTAA AAATTTATCT CAACGAAACT CGCCCAGAGT TAGGCAAATC ACAGATTATT
ATCTGGCCTG AGTCGGCGAT TCCGGATCTC GAAATCAATC AGCAGCCTTT CCTTCGTTCG
CTGGACGAGA TGTTACGCGA AAAAAATAGC ACGCTGATCA CCGGTATTGT CGATGCGCGT
CTCAATAAAC AGAATCGATA CGATACCTAC AATACGATTA TTACGTTGGG CAAGGATAAT
CCATACAGTT ATGACTCGCC CAATCGCTAC AATAAAAATC ACCTTGTACC CTTTGGCGAG
TTCGTTCCGC TGGAGTCTAT CCTGCGTCCG CTGGCGCCGT TCTTCGATCT GCCCATGTCC
TCCTTTAGCC GCGGCCCTTA TATCCAGCCG CAGTTACATG CGCACGACTA TAAGCTGACG
GCGGCAATCT GTTATGAAAT TATTCTTGGC GAACAGGTGC GGGATAACTT CCGCCCGGAC
ACCGACTATC TGCTGACGAT TTCTAACGAC GCCTGGTTTG GTAAGTCCAT TGGCCCGTGG
CAACATTTCC AGATGGCGCG GATGCGTTCG CTGGAGCTGG CGCGTCCGTT ACTGCGCAGT
ACTAATAACG GTATTACGGC GGTGATTGGC CCGCAGGGCG AAATCCAGGC GATGATCCCG
CAGTTCACAC GCCAGGTACT GACCACCAAT GTCACGCCAA CCACGGGGTT AACTCCCTAT
GCTCGTACCG GCAACTGGCC GCTATGGGTA CTGACCGCGC TGTTTGCTTT TGGCGCGGTA
GTGATGAGTC TGCGACAACG ACGGAAATAA
|
|---|
| Protein sequence | MTRPSQNWTN NSNSGLKMAF ASLIERQRIR LLLALLFGAC GTLAFSPYDV WPAAIVSLIG
LQALTFNRRP LQSAAIGYCW GLGLFGSGIN WVYVSIAQFG GMPGPVNVFL VVLLAAYLSL
YTGLFAGILS RLWPKTNWLR VAIAAPAVWQ ITEFLRGWVL TGFPWLQFGY SQVDGPLKGL
APVMGVEAIN FLLMMVSGLL ALALATRNWR PLAVAVILFA LPFPLRYIQW FTLEPAKATQ
VSLVQGDIPQ SLKWDENQLL NTLKIYLNET RPELGKSQII IWPESAIPDL EINQQPFLRS
LDEMLREKNS TLITGIVDAR LNKQNRYDTY NTIITLGKDN PYSYDSPNRY NKNHLVPFGE
FVPLESILRP LAPFFDLPMS SFSRGPYIQP QLHAHDYKLT AAICYEIILG EQVRDNFRPD
TDYLLTISND AWFGKSIGPW QHFQMARMRS LELARPLLRS TNNGITAVIG PQGEIQAMIP
QFTRQVLTTN VTPTTGLTPY ARTGNWPLWV LTALFAFGAV VMSLRQRRK
|
|---|
| |