Gene SNSL254_A0718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0718 
SymbolrihA 
ID6483565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp729955 
End bp730890 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content54% 
IMG OID642736131 
Productribonucleoside hydrolase 1 
Protein accessionYP_002039904 
Protein GI194445998 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1957] Inosine-uridine nucleoside N-ribohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.647996 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTTC CTATTCTGTT TGATTGCGAT CCGGGTCATG ACGACGCTAT CGCAATTGTT 
CTCGCCCTCG CCTCACCTGA ACTGGATGTT AAAGCAATCA CCTCTTCTGC CGGCAACCAG
ACACCCGACA AAACGCTGCG TAACGTATTA CGCATGTTAA CGTTACTCAA CCGTACGGAT
ATCTCCGTAG CCGGCGGAGC CGTAAAACCG CTGATGCGCG ATCTGATTAT TGCCGATAAC
GTCCACGGTG AGAGTGGGCT GGATGGCCCG GCATTGCCGG AACCCGCTTT CGCTCCTCTG
GACTGTACCG CCGTGGAACT GATGGCTAAA GTGCTGCGCG AAAGTCCGGA ACCGGTCACG
ATTGTCTCCA CCGGGCCGCA AACTAACGTC GCATTGCTTT TGAACAGCCA CCCGGAATTG
CACGCCAAAA TCGCCCGTAT CGTGATTATG GGTGGTGCGA TGGGCCTCGG GAACTGGACG
CCCGCGGCGG AATTCAATAT CTATGTTGAT CCTGAAGCCG CTGAGATCGT ATTCCAGTCG
GGTATCCGAG TGGTAATGGC CGGGCTGGAC GTCACGCATA AAGCGCAAAT ACATCGTGAA
GATACCGAGC GATTCCGCGC TATCGGCAAC CCTGTTTCGA CGATCGTGGC AGAACTACTC
GACTTTTTCT TTGAATATCA TAAAGACGAA AAATGGGGAT TCATCGGCGC GCCGCTGCAC
GACCCATGTA CCATTGCCTG GCTGCTGAAA CCTGAACTGT TTACCACCGT CGAGCGCTGG
GTCGGCGTGG AAACCCAAGG CAAATACACA CAGGGGATGA CTGTGGTGGA TTATTACTTC
CTGAGCGGCA ATAAGCCAAA CGCCACCGTG ATGGTGGACG TGGATCGCCA AGGATTTGTC
GATTTGCTGG CGGAACGGCT GCAATACTAC GCATAA
 
Protein sequence
MALPILFDCD PGHDDAIAIV LALASPELDV KAITSSAGNQ TPDKTLRNVL RMLTLLNRTD 
ISVAGGAVKP LMRDLIIADN VHGESGLDGP ALPEPAFAPL DCTAVELMAK VLRESPEPVT
IVSTGPQTNV ALLLNSHPEL HAKIARIVIM GGAMGLGNWT PAAEFNIYVD PEAAEIVFQS
GIRVVMAGLD VTHKAQIHRE DTERFRAIGN PVSTIVAELL DFFFEYHKDE KWGFIGAPLH
DPCTIAWLLK PELFTTVERW VGVETQGKYT QGMTVVDYYF LSGNKPNATV MVDVDRQGFV
DLLAERLQYY A