| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0711 |
|---|
| Symbol | |
|---|
| ID | 6484764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 721475 |
|---|
| End bp | 722470 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642736124 |
|---|
| Product | Sel1 repeat family |
|---|
| Protein accession | YP_002039897 |
|---|
| Protein GI | 194445235 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.556165 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 0.833851 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCATT CCATAACCAG TCATCCCTGC GACAACGTAT CTTTAGCACA ATTAACCGAA
CTGGCGCAGT CAGGAAATAG TGAAGCTCAA TATATATTAG GCCGTTTATA TAATGACGAA
CGTATAGATG GCAGCGAAGA GGATAAGCTC TCTTTTTATT GGTTGCAGCA GGCAGCTGAA
CAAGGACACT GCGAGGCACA ATATTGGCTC GGCTTACGAT ACAAAGACAC GCCTACCGAC
ATGAAAGATA ATACGCTGGC TTTATTCTGG TCAGAAAAAG CCGCACAGCA AGGACACCGC
CACGCTTTCA ACACATTAGG CTGGGTTCAG GAAGGAGAAA CCGGGATGGC GCCAGATTAT
GCCCAGGCCG TTGCCTGGTA TCGCAAAGGA GCAGAACAGA GCCACAACCT TGCGCAATAT
AATCTCGGGA GAATGTATCA TTCAGGAACT GGCGTAGAGC AAAATGATAC ACAGGCACTC
TACTGGTTTA AACAGGCAGC ATTACAAGGC CATTGCGCCA GCCAGGAAAG ACTGGCGTAT
ATGTATGGCA ATGGGAAAGG ATGTCGGAAA AATTTATCCC TTGCCGCCCT TTGGTACAAG
AAGAGCGCGC TACAAGAGAG CAGCTACTCG CAATATCAGA TGGGCTATTG TTATTACATC
GGAAAAGGTA TCAAACAAGA TTACCAGCAG GCAATATACT GGTTTCGAAA AGCGGCAGAC
CAGGGTGACA ATGATGCCTA TAACAGTATC GGCTGGATGT ACAAATGCGG TCATGGCGTC
GAGCAAAATT ATTCGCTAGC ACTGGAATGG TTCCACAAAT CAGCAGAATG TAACAATTCA
TCGGGCTGGT ACAACCTCGG ATGCATGTAC AGAGATGGAT ACGGTACCGC ACAAGACCTA
CAACAAGCGC TCTACTGGTT CAAAAAAGCA CAGCCCACGG GCAAATGGAA CGTCGACGAA
GAGATCCGCA AACTGGAAGC CCAACTGCAC GCTTAA
|
|---|
| Protein sequence | MNHSITSHPC DNVSLAQLTE LAQSGNSEAQ YILGRLYNDE RIDGSEEDKL SFYWLQQAAE
QGHCEAQYWL GLRYKDTPTD MKDNTLALFW SEKAAQQGHR HAFNTLGWVQ EGETGMAPDY
AQAVAWYRKG AEQSHNLAQY NLGRMYHSGT GVEQNDTQAL YWFKQAALQG HCASQERLAY
MYGNGKGCRK NLSLAALWYK KSALQESSYS QYQMGYCYYI GKGIKQDYQQ AIYWFRKAAD
QGDNDAYNSI GWMYKCGHGV EQNYSLALEW FHKSAECNNS SGWYNLGCMY RDGYGTAQDL
QQALYWFKKA QPTGKWNVDE EIRKLEAQLH A
|
|---|
| |