Gene SNSL254_A0708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0708 
Symbol 
ID6485892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp717921 
End bp718874 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content52% 
IMG OID642736121 
Product2-keto-3-deoxygluconate permease 
Protein accessionYP_002039894 
Protein GI194444287 
COG category 
COG ID 
TIGRFAM ID[TIGR00793] 2-keto-3-deoxygluconate transporter 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.155068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.515565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA AAAAAACACT GGAACGTTTT CCTGGTGGTA TGATGGTTGT ACCGCTAATC 
ATCGGCGCAT TGTTTAAAAC CTTTGCCCCG GAGGCGCTGG AAATAGGCGG TTTTGTCACC 
TCTATTTCGC ATGGCGCAAT GGCGATTGTA GGCATGTTTT TAGTCTGTAT GGGCGCGGAT 
ATCCAGTTTA AAGCCGCGCC GAAAGCGCTG AAAAAAGGCG CTGCGATCAC CTTTGCGAAA 
TTTGCCAGCG GCGTGATTAT TGGCATTCTG GTCGGAAAAT TTTGCGGCCC GGATGGGTTA 
TTAGGTCTGT CGGCTTTAGC GATTATTTCG GCGATGACCA ACTCAAACAG TGGGTTATAT 
GCCGCGTTGG TGGGGGAGTA CGGCGATGAA ACCGACGGCG GCGCGATTGC GGTAATATCG 
TTGAACGATG GTCCCTTTTT CACCATGCTG GCGTTAGGGT CGGCAGGCAT GGTGTCGATA 
CCCTTTATGA ATCTGGTGGC GGTTATTATT CCCATTATCA TTGGCATGAT TTTGGGTAAT 
CTGGATGAGG ACATGCGCAA GTTTCTTAAA CAGGGCAGCG TGGTAACGAT TCCTTTTTTT 
GCCTTTGGGT TAGGATACGG TATTGATTTC GCAAGACTTA TCACGGCAGG TTCTTCAGGC 
ATTTTACTGG GACTCATGAC GGTGGCGATT GGCGGATTTT TTAATATTTT CGCCGATCGT 
CTGACGGGAG GCAGCGGCGT GGCAGGCGCG GCGGTCTCCA CCACCTCTGG CAACGCCGTC 
GCGACGCCAG CGGCAATCGC GCTGCTCGAT CCGCATTTTA CCGACCTGGC GTCGACGGCG 
GCGGCGCAGG TGGCGGCCTC GACGATTATT ACCGCTCTGT GCGCCCCCTT CCTGACTGTA 
TGGATAAAAA AACGCTACGA TCGTAAACTG AACCCAGCCG CCGCAGGCGG TTAG
 
Protein sequence
MKIKKTLERF PGGMMVVPLI IGALFKTFAP EALEIGGFVT SISHGAMAIV GMFLVCMGAD 
IQFKAAPKAL KKGAAITFAK FASGVIIGIL VGKFCGPDGL LGLSALAIIS AMTNSNSGLY 
AALVGEYGDE TDGGAIAVIS LNDGPFFTML ALGSAGMVSI PFMNLVAVII PIIIGMILGN 
LDEDMRKFLK QGSVVTIPFF AFGLGYGIDF ARLITAGSSG ILLGLMTVAI GGFFNIFADR 
LTGGSGVAGA AVSTTSGNAV ATPAAIALLD PHFTDLASTA AAQVAASTII TALCAPFLTV 
WIKKRYDRKL NPAAAGG