Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0703 |
Symbol | holA |
ID | 6482230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 711886 |
End bp | 712917 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642736116 |
Product | DNA polymerase III subunit delta |
Protein accession | YP_002039889 |
Protein GI | 194445031 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1466] DNA polymerase III, delta subunit |
TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0770621 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGGT TGTATCCTGA ACAACTCCGC GCGCAGCTCA ACGAAGGGCT GCGTGCGGCA TATCTGCTAT TGGGCAACGA TCCGCTGCTG CTGCAGGAAA GTCAGGACGC TATTCGTCTG GCGGCTGCGT CGCAAGGCTT CGAAGAGCAC CACGCTTTTA CTCTCGATCC CAGTACCGAC TGGGGATCGC TTTTCTCACT TTGCCAGGCG ATGAGTCTGT TCGCCAGCCG TCAAACGCTG GTGCTGCAAC TGCCGGAAAA CGGGCCTAAC GCGGCAATGA ATGAGCAACT CGCCACGCTG AGCGAGCTGC TGCATGACGA CCTGTTATTA ATAGTACGCG GAAACAAACT CACCAAAGCG CAGGAAAACG CCGCCTGGTA TACCGCGCTG GCAGACCGTA GCGTTCAGGT CAGTTGTCAG ACGCCGGAGC AGGCGCAGCT TCCCCGCTGG GTAGCCGCCA GAGCGAAAGC ACAGAATTTG CAACTGGATG ACGCCGCGAA CCAACTGCTG TGCTATTGCT ATGAGGGCAA TCTGTTGGCG CTGGCGCAGG CGCTGGAACG GCTGTCGCTG CTTTGGCCTG ACGGTAAGTT AACGCTTCCT CGCGTAGAGC AGGCCGTCAA TGACGCCGCC CACTTTACCC CTTTCCACTG GGTGGATGCG TTACTGATGG GGAAAAGCAA ACGCGCGCTG CATATTCTGC AACAGCTACG CCTTGAAGGC AGCGAACCGG TTATTCTGCT GCGCACCCTC CAGCGAGAGC TGCTGCTACT GGTAAATCTC AAACGTCAGT CCGCGCATAC GCCGTTACGC GCGCTGTTTG ATAAACACCG GGTCTGGCAA AACCGTCGCC CCATGATCGG CGACGCGTTG CAGCGTCTCC ATCCTGCGCA GCTTCGCCAG GCCGTGCAGT TACTGACGCG TACAGAAATT ACGCTCAAAC AGGATTATGG TCAGTCGGTA TGGGCAGATC TTGAAGGGCT GTCGCTCCTG CTCTGCCATA AGGCGCTGGC AGACGTATTT ATTGATGGGT GA
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Protein sequence | MIRLYPEQLR AQLNEGLRAA YLLLGNDPLL LQESQDAIRL AAASQGFEEH HAFTLDPSTD WGSLFSLCQA MSLFASRQTL VLQLPENGPN AAMNEQLATL SELLHDDLLL IVRGNKLTKA QENAAWYTAL ADRSVQVSCQ TPEQAQLPRW VAARAKAQNL QLDDAANQLL CYCYEGNLLA LAQALERLSL LWPDGKLTLP RVEQAVNDAA HFTPFHWVDA LLMGKSKRAL HILQQLRLEG SEPVILLRTL QRELLLLVNL KRQSAHTPLR ALFDKHRVWQ NRRPMIGDAL QRLHPAQLRQ AVQLLTRTEI TLKQDYGQSV WADLEGLSLL LCHKALADVF IDG
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