Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0694 |
Symbol | |
ID | 6482878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 704161 |
End bp | 705294 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642736107 |
Product | rare lipoprotein A |
Protein accession | YP_002039880 |
Protein GI | 194442270 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAAGC AGTTGCCTGT AATCTGCGTC GCGGCAGGGA TAGTACTACT CGCGGCATGT ACTAATGACG GCGGTCAGCA GCAAACCACC GTCGCGCCGC AACCTGCGGT ATGTAATGGT CCGACTGTGG AAATCAGCGG AGCGGAACCG CGTTATGAAC CTCTGAATCC GACCGCAAAC CAGGATTATC AGCGTGACGG TAAAAGTTAT AAAATCGTTC AGGACCCGTC CCGCTTTAGC CAGGCTGGCC TGGCCGCTAT TTATGATGCG GAACCCGGCA GTAATTTAAC CGCCTCCGGG GAGATGTTCG ATCCGATGCA GCTTACCGCC GCCCATCCGA CACTGCCTAT CCCCAGCTAT GCGCGAATCA CCAACCAGGC CAACGGTCGC ATGATCGTCG TGCGTATTAA CGATCGCGGC CCCTATGGCA CCGATCGGGT CATCTCCCTG TCCCGCGCGG CGGCGGATCG TCTGAATACC TCGAATAATA CTAAAGTACG GATTGACCCT ATTATCGTGG CGCCGGATGG TTCGCTCTCC GGCCCGGGGA TGGCCTGTAC GACGGTGGCG AAACAGACCT ACGCTCTGCC CCCGCGCCCT GATTTAAGCG GCGGAATGGG AAGCGCCTCT TCAGCGCCTG CGCAACCGCA AGGCGACGTT CTTCCGGTCA GTAATTCCAC GTTGAAAAGT GACGACACCA CCGGCGCGCC GGTGAGCAGC AGCGGCTTCC TCGGCGCGCC GACTACGCTG GCGCCTGGCG TGCTGGAGGG TAATGAACCG ACGCCGGCGC CACAGCCAGC GCCGGTTTCC GCGCCGGTGG CGGCTCCAGC GACTGCGACG CCGGTTAGCG CGCCTGCCGC CGCGGCCCCG GTATCTGCCC CGGTGAGCGC GCCTGCCACC GCGGCGAGCG GTCGTTTCGT CGTCCAGGTC GGCGCCGTCA GCGATCAAAC GCGCGCGCAG CAGTACCAAC AGCGTTTAAG TCAGCAGTTC AGCGTACCAG GGCGCGTAAT ACAAAACGGC GCGGTCTGGC GTATTCAACT GGGGCCTTTT GCCAGTAAAG CCGAAGCCAG CGCGTTACAG CAACGTTTGC AAACAGAAGC ACAATTACAG TCCTTTATCG CCAGCGCGCA GTAA
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Protein sequence | MRKQLPVICV AAGIVLLAAC TNDGGQQQTT VAPQPAVCNG PTVEISGAEP RYEPLNPTAN QDYQRDGKSY KIVQDPSRFS QAGLAAIYDA EPGSNLTASG EMFDPMQLTA AHPTLPIPSY ARITNQANGR MIVVRINDRG PYGTDRVISL SRAAADRLNT SNNTKVRIDP IIVAPDGSLS GPGMACTTVA KQTYALPPRP DLSGGMGSAS SAPAQPQGDV LPVSNSTLKS DDTTGAPVSS SGFLGAPTTL APGVLEGNEP TPAPQPAPVS APVAAPATAT PVSAPAAAAP VSAPVSAPAT AASGRFVVQV GAVSDQTRAQ QYQQRLSQQF SVPGRVIQNG AVWRIQLGPF ASKAEASALQ QRLQTEAQLQ SFIASAQ
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