| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0680 |
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| Symbol | |
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| ID | 6482640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 692436 |
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| End bp | 694097 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642736093 |
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| Product | sensor kinase DpiB |
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| Protein accession | YP_002039866 |
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| Protein GI | 194444298 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.520362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTGTC AGAAAAATAA AAAGCTGTTT CCTTTTTTTC GGCAACTCGC GTTTCCGTTA
CGTATTTTTC TGCTCATTCT GGTAGTTTCT GTTTTCATCG TGGCAGCGTT AGCACAATAT
TTGTCTGCCA GTTTCGAAGA TTATCTGGCG TCCCATGTTC GTGATATGGC GATGAATCAG
GCAAAAATTA TTGCTTCTAA CGACAGCATT ATCGCTGCCG TAAAAAACCG GGACTATAAA
CGCCTGGCGA TAATTGCGAA TAAACTGCAG CGCGGGACGG ATTTTGACTA TGTGGTGATA
GGCGATCGCC ACTCGATCCG GCTTTACCAT CCGAATCCGG AAAAAATCGG CTATCCCATG
CAGTTTACGA AACCCGGCGC GCTGGAAAGA GGAGAAAGTT ATTTCATTAC CGGTAAGGGC
TCAATAGGGA TGGCGATGCG CGCCAAAACG CCTATCTTTG ACAACGAAGG CAACGTGATC
GGCGTTGTTT CAATTGGCTA TCTGGTCAGT AAAATCGACT CCTGGCGGCT GGACTTCTTA
TTACCGATGG CGGGGGTTTT TGTCCTGTTG CTGGTGGTAT TAATGCTGCT TTCCTGGTTT
TTCGCCGCGC ATATCCGCCG ACAAATGCTG GGCATGGAGC CGAAACAGAT TGCGCGCGTG
GTACGCCAGC AGGAGGCGTT GTTTAGCTCG GTTTATGAAG GGCTGATCGC CGTTGATCCT
GAGGGACATA TTACCGCGAT TAACCGCAGT GCGAGAAAAA TGTTGGGGCT GCCGTCGCCG
GGGCGTCAGT GGCTGGGCAA GCTGATCGCG GAAGTCGTCA ATCCGGCAGA CTTTTTTACC
TGCCAGATCG CAGAAAGACG CCAGGACGTG ATGGCCAACT TCAATGGCCT GAGCGTCATC
GCCAATCGTG AGGCTATCCG TTCCGGCGAG GAGCTGCTGG GCGCTATTAT TAGTTTTCGC
AGCAAAGATG AAATCGCGAC GTTGAACGCG CAGCTAACCC AGATTAAACA GTATGTTGAG
AGCCTGCGCA CGCTACGCCA TGAGCACCTG AACTGGATGT CGACTCTGAA CGGCCTGCTG
CAAATGAAAG AGTATGATCG GGTCAGAGAG ATGGTGCAGG GTGAGTCGCA GGCGCAGCAG
CAACTTATTG ATAGTTTACG CGGCGCCTTC GCCGATCGTC AGGTGGCCGG TTTGCTGTTT
GGCAAAGTTC AGCGCGCGCG TGAACTGGGG CTCAAGATGG TGATTGTTCC CGGCAGCCAG
CTACATCAAC TGCCGGAGGG GCTGGATAGC ACGGAGTTCG CCGCCATCGT CGGGAATCTG
CTGGATAACG CGTTTGAGGC GAGTTTACGT ACGCAGGAAG GCGACAAGAC CATCGAACTT
TTCCTGAGCG ACGAGGGCGA CGAGGTGGTA ATAGAGGTCG CCGACCAGGG CTGCGGCGTT
CCTGAAGCGC TGCGGGAAAA GATTTTTGAA CAGGGCGTAA GTACCCGCAC CGACGAACCC
GGTGAGCATG GTATCGGGTT ATATCTGATT GCAAGTTATG TGGGGCGCTG TGGCGGGGTC
ATTACGCTGG AAGACAATGA TCCTTGTGGC ACCTTATTTT CTTTATTCCT TCCGAAAGTG
AAAAAAAACG ATGACAGAAC CATTAACCCT ATTGATCGTT GA
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| Protein sequence | MSCQKNKKLF PFFRQLAFPL RIFLLILVVS VFIVAALAQY LSASFEDYLA SHVRDMAMNQ
AKIIASNDSI IAAVKNRDYK RLAIIANKLQ RGTDFDYVVI GDRHSIRLYH PNPEKIGYPM
QFTKPGALER GESYFITGKG SIGMAMRAKT PIFDNEGNVI GVVSIGYLVS KIDSWRLDFL
LPMAGVFVLL LVVLMLLSWF FAAHIRRQML GMEPKQIARV VRQQEALFSS VYEGLIAVDP
EGHITAINRS ARKMLGLPSP GRQWLGKLIA EVVNPADFFT CQIAERRQDV MANFNGLSVI
ANREAIRSGE ELLGAIISFR SKDEIATLNA QLTQIKQYVE SLRTLRHEHL NWMSTLNGLL
QMKEYDRVRE MVQGESQAQQ QLIDSLRGAF ADRQVAGLLF GKVQRARELG LKMVIVPGSQ
LHQLPEGLDS TEFAAIVGNL LDNAFEASLR TQEGDKTIEL FLSDEGDEVV IEVADQGCGV
PEALREKIFE QGVSTRTDEP GEHGIGLYLI ASYVGRCGGV ITLEDNDPCG TLFSLFLPKV
KKNDDRTINP IDR
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