Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0675 |
Symbol | citF |
ID | 6482336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 688238 |
End bp | 689767 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642736088 |
Product | citrate lyase, alpha subunit |
Protein accession | YP_002039861 |
Protein GI | 194446620 |
COG category | [C] Energy production and conversion |
COG ID | [COG3051] Citrate lyase, alpha subunit |
TIGRFAM ID | [TIGR01584] citrate lyase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAGA AAAATGAATC TCAACGCCAG GATCGCGTAG CAGCCTGGAG CCGTCACGCT GAAAGCGAAC TGAGCGCTTA CCAAAGTGCG GCAAAATTGG ATCTACAAGC GCAAAAACCG CGCGACCACA AACTGTGCGC CAGCCTGGAA GAGGCCATCC GCCGTTCCGG TTTACGCGAC GGCATGACGG TCTCCTTTCA CCACGCGTTT CGCGGCGGCG ATCTGACGAT TAACCTGGTG ATGGAAACCA TCGCGAAGAT GGGCTTCAAA AACCTGACGC TGGCCTCCAG TTCGCTGAGC GACTGCCATG CGCCGCTGGT TGAACACATT CGTAACGGGG TGGTCAGCCG CATCTACACG TCAGGCCTGC GCGGCCCGCT GGCGGAAGAA ATTTCTCGCG GCTTGCTGGC TGAGCCGGTT CAGATTCACT CCCACGGCGG TCGTGTACAT CTGGTACAAA GCGGCGAACT CAATATTGAT GTTGCATTTC TTGGCGTGCC CTCCTGCGAT GAATTCGGTA ATGCTAACGG TTATACCGGC AAAGCCTGTT GCGGTTCACT GGGCTACGCG ATGGTGGATG CCGACAGCGC GAAGCAGGTC GTGATGCTGA CGGAGCAACT GCTGCCGTAT CCGCATAACC CGGCAAGCAT CGCTCAGGAT CAGGTTGATC TGATCGTGCA AATCGAAGAA GTCGGTGATG CAAACAAAAT CGGCGCTGGC GCGACCCGCA TGACCACTAA TCCGCGTGAA CTGCTGATCG CCCGCAGCGC GGCGGAAGTC ATTGCTCACT CCGGCTACTT CAACGAAGGT TTCTCCCTGC AAACCGGCAC CGGCGGCGCA TCGCTGGCGG TCACCCGCTT CCTGGAAGAC AAAATGCGTA GCCGCAACAT TGTGGCTAAT TTCGCGCTGG GCGGTATCAC CGCCACCATG GTCGACCTGC ATGAAAAGGG CTTAATCCGC AAACTGCTTG ACGTTCAGAG CTTCGATCGT AACGCTGCGC AATCTTTGGC CCGCAACCCG AACCATATCG AAATCAGCGC TAACCAGTAC GCCAACTGGG GCTCTAAAGG CGCTTCCGTC GACCGTCTGG ACGTGGTGGT ACTGAGCGCG CTGGAAGTAG ACACCCACTT CAATGTTAAC GTGCTGACCG GCTCCGACGG CGTTCTACGC GGCGCGTCCG GCGGTCACTG CGATACCGCC GTCGCGGCGG CGCTGTCCAT CATCGTCGCG CCGCTGGTGC GCGGTCGCAT CCCAACGCTG GTTGATAACG TCACCACCTG CGTCACACCG GGCTCCAGCG TTGACATTCT GGTCACCGAT CACGGTATCG CCGTCAATCC GGCGCGTCCG GAGTTGGCTG AACGCCTGAA AGCAGCGGGA ATGAAAGTGG TATCGATTGA GTGGCTGCGC GAACGCGCGC AACTGCTTAC CGGTCAGCCC CGCCCTATCG AATTCACCGA CCGCGTGATT GCTGTCGTGC GTTATCGCGA CGGTTCAGTG ATCGATGTGG TGCATCAGGT GAAGGAATAA
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Protein sequence | MTQKNESQRQ DRVAAWSRHA ESELSAYQSA AKLDLQAQKP RDHKLCASLE EAIRRSGLRD GMTVSFHHAF RGGDLTINLV METIAKMGFK NLTLASSSLS DCHAPLVEHI RNGVVSRIYT SGLRGPLAEE ISRGLLAEPV QIHSHGGRVH LVQSGELNID VAFLGVPSCD EFGNANGYTG KACCGSLGYA MVDADSAKQV VMLTEQLLPY PHNPASIAQD QVDLIVQIEE VGDANKIGAG ATRMTTNPRE LLIARSAAEV IAHSGYFNEG FSLQTGTGGA SLAVTRFLED KMRSRNIVAN FALGGITATM VDLHEKGLIR KLLDVQSFDR NAAQSLARNP NHIEISANQY ANWGSKGASV DRLDVVVLSA LEVDTHFNVN VLTGSDGVLR GASGGHCDTA VAAALSIIVA PLVRGRIPTL VDNVTTCVTP GSSVDILVTD HGIAVNPARP ELAERLKAAG MKVVSIEWLR ERAQLLTGQP RPIEFTDRVI AVVRYRDGSV IDVVHQVKE
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