Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0659 |
Symbol | |
ID | 6483769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 672451 |
End bp | 673311 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 642736074 |
Product | LysR family transcriptional regulator |
Protein accession | YP_002039847 |
Protein GI | 194443577 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGTTATAT TTGAATGTAT CTATCAACAT TTAAGCATTA GCAAAGCAGC AGAAACACTC TATATTACAC CTTCTGCCGT AAGCCAGTCA TTGCAACGCC TGCGCACGCA ATTCAACGAC CCTCTATTTA TTCGTTCAGG CAAAGGAATT ACGCCTACCG TAACAGGCAT TAATTTACAT TATCATTTAG AAAATAATCT TAACAGCCTG GAACAAACTA TTAATATAAT GAATCAGTCC AGCCTGAAGA AAAAATTTAT TATCTACAGC CCACAGCTGT TGATCACCCA ATATGTGATA AAATTAGTTA AATATATCCG CAAAGATCCA CAGGTTGAAA TTGAACATCA CGACATTTTG ACCACTGACG AACTGCCTGA AGATCTGCTT GCCTACCGCA AAGCAGATAT TGTGGTTTCA ATGGCCCCAC TGAATAATCG TTCTATTGTT TGTACTCACT TTAATAGGCT AGAATGCATC CTGGTTTGCA GTGAAAACCA TCCCCGACTA GGCGACACCG CCACTATCGA CGAAATTCTA CAAGAGTCAT TTACGCAACT CGTCTCCCGG GCAACCGGTA TGAAAGAATA TCATTCACTT ATGGATGATG TGCTGGGGGA AAGAATAATT GGTTTCAGAA GCAAATCGCT GATGACCATC GCCAACTCTA TCAGCTCCAC GGAGCTTATT GGTTTTTTAC CACAAACATT TTTTGACTAT TACTCTTCCT CTATCAAACT TAAAAAAGTC ACCATACCTT TTACCATTGC TCCCATACAA TTCTATCTTA TGTATAATAG GGCTTCGCTG AATAATAGCG GATTTGCTGA GCTCATTGAG CACATCACAA AAAAACATTA A
|
Protein sequence | MVIFECIYQH LSISKAAETL YITPSAVSQS LQRLRTQFND PLFIRSGKGI TPTVTGINLH YHLENNLNSL EQTINIMNQS SLKKKFIIYS PQLLITQYVI KLVKYIRKDP QVEIEHHDIL TTDELPEDLL AYRKADIVVS MAPLNNRSIV CTHFNRLECI LVCSENHPRL GDTATIDEIL QESFTQLVSR ATGMKEYHSL MDDVLGERII GFRSKSLMTI ANSISSTELI GFLPQTFFDY YSSSIKLKKV TIPFTIAPIQ FYLMYNRASL NNSGFAELIE HITKKH
|
| |