Gene SNSL254_A0655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0655 
Symbol 
ID6486183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp668084 
End bp669172 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content58% 
IMG OID642736070 
Producthypothetical protein 
Protein accessionYP_002039843 
Protein GI194446631 
COG category[C] Energy production and conversion 
COG ID[COG0371] Glycerol dehydrogenase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCACA CTGAGATCCG CGTCGTTACC GGCCCGGCGA ATTATTTTTC CCATGCAGGA 
AGCCTCGAAA GACTGACCGA CTTTTTCACG CCGGAACAGC TTTCCCACGC CGTTTGGGTG
TACGGCGAAC GCGCGATTGC CGCCGCCCGG CCTTACCTGC CGGAAGCGTT TGAACGTGCT
GGCGCAAAGC ATCTGCCGTT TACCGGCCAT TGTAGCGAAC GCCATGTTGC CCAACTGGCG
CACGCCTGCA ACGACGATCG TCAGGTGGTG ATAGGCGTCG GCGGCGGCGC GCTGCTCGAT
ACCGCCAAAG CGCTCGCCCG CCGTCTGGCG CTGCCGTTTG TCGCTATCCC GACAATCGCG
GCAACCTGCG CCGCCTGGAC ACCGCTTTCC GTCTGGTATA ACGACGCGGG ACAGGCGTTA
CAGTTCGAAA TTTTTGATGA TGCCAATTTT CTGGTGCTGG TCGAACCGCG CATTATTCTG
CAGGCGCCCG ATGACTATCT GTTAGCTGGC ATTGGCGATA CGCTGGCGAA ATGGTATGAA
GCCGTTGTGC TTGCGCCGCA GCCTGAAACG TTGCCATTGA CCGTAAGGCT GGGCATTAAC
AGCGCGTGCG CTATTCGCGA TCTCCTGCTG ACCAGCAGCG AACAAGCATT AGCGGATAAA
CAGCAGCGTC GGCTGACCCA GGCATTTTGC GACGTGGTGG ATGCGATTAT CGCTGGCGGC
GGTATGGTCG GCGGCCTCGG GGAACGCTAT ACCCGTGTCG CCGCCGCCCA TGCGGTACAC
AACGGTCTGA CCGTTCTGCC GCAAACGGAA AAATTCCTGC ACGGAACGAA AGTGGCTTAT
GGCATTCTGG TGCAAAGCGC GCTACTGGGA CAAGATGACG TGCTGGCGCA ATTGATTACA
GCGTACCGGC GATTTCATCT GCCGACCCGG CTTAGCGAAC TGGACGTGGA TATTCATAAC
ACCGCCGAGA TCGATAGGGT CATCGCGCAT ACCCTGCGCC CGGTCGAATC CATCCACTAT
TTACCGGTGA CGTTAACGCC AGACACCCTG CGTGCGGCGT TTGAAAAAGT TGAATTTTTC
AGAATATAG
 
Protein sequence
MNHTEIRVVT GPANYFSHAG SLERLTDFFT PEQLSHAVWV YGERAIAAAR PYLPEAFERA 
GAKHLPFTGH CSERHVAQLA HACNDDRQVV IGVGGGALLD TAKALARRLA LPFVAIPTIA
ATCAAWTPLS VWYNDAGQAL QFEIFDDANF LVLVEPRIIL QAPDDYLLAG IGDTLAKWYE
AVVLAPQPET LPLTVRLGIN SACAIRDLLL TSSEQALADK QQRRLTQAFC DVVDAIIAGG
GMVGGLGERY TRVAAAHAVH NGLTVLPQTE KFLHGTKVAY GILVQSALLG QDDVLAQLIT
AYRRFHLPTR LSELDVDIHN TAEIDRVIAH TLRPVESIHY LPVTLTPDTL RAAFEKVEFF
RI