Gene SNSL254_A0633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0633 
Symbol 
ID6484557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp642553 
End bp643134 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content54% 
IMG OID642736048 
ProductTetR family transcriptional regulator 
Protein accessionYP_002039821 
Protein GI194446317 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTCGTC CGAAGAGTGA AGACAAAAAA CAAGCATTAC TGGAAGCGGC AACCCAGGCG 
ATAGCGCAAT CCGGTATCGC CGCCTCAACG GCGGTGATTG CGCGTAACGC AGGTGTTGCA
GAAGGAACAT TGTTTCGCTA TTTCGCGACC AAAGATGAGC TGATTAACAC GTTGTATTTG
CATTTAAAGC AGGATCTCTG CCAGTCAATG ATAATGGAGC TGGATCGATC CATTACCGAT
GCCAAAACGA TGACCCGCTT TATCTGGAAC AGTTACATCA GTTGGGGTCT GAACCATCCC
GCGCGCCACC GGGCGATCCG TCAACTGGCC GTCAGCGAAA AGCTCACCAA AGAGACGGAA
CAACGGGCCG ACGATATGTT CCCCGAATTG CGCGATTTAT GTCATCGTTC CGTTTTGATG
GTGTTTATGT CGGATGAGTA CCGCGCCTTC GGCGACGGCC TTTTTCTGGC GCTGGCTGAA
ACAACAATGG ATTTCGCCGC GCGCGATCCC GCTCGCGCTG GCGAATATAT TGCGCTGGGA
TTCGAAGCGA TGTGGCGCGC GCTGACTCGC GAGGAGCAAT AA
 
Protein sequence
MARPKSEDKK QALLEAATQA IAQSGIAAST AVIARNAGVA EGTLFRYFAT KDELINTLYL 
HLKQDLCQSM IMELDRSITD AKTMTRFIWN SYISWGLNHP ARHRAIRQLA VSEKLTKETE
QRADDMFPEL RDLCHRSVLM VFMSDEYRAF GDGLFLALAE TTMDFAARDP ARAGEYIALG
FEAMWRALTR EEQ