Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0633 |
Symbol | |
ID | 6484557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 642553 |
End bp | 643134 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642736048 |
Product | TetR family transcriptional regulator |
Protein accession | YP_002039821 |
Protein GI | 194446317 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 84 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTCGTC CGAAGAGTGA AGACAAAAAA CAAGCATTAC TGGAAGCGGC AACCCAGGCG ATAGCGCAAT CCGGTATCGC CGCCTCAACG GCGGTGATTG CGCGTAACGC AGGTGTTGCA GAAGGAACAT TGTTTCGCTA TTTCGCGACC AAAGATGAGC TGATTAACAC GTTGTATTTG CATTTAAAGC AGGATCTCTG CCAGTCAATG ATAATGGAGC TGGATCGATC CATTACCGAT GCCAAAACGA TGACCCGCTT TATCTGGAAC AGTTACATCA GTTGGGGTCT GAACCATCCC GCGCGCCACC GGGCGATCCG TCAACTGGCC GTCAGCGAAA AGCTCACCAA AGAGACGGAA CAACGGGCCG ACGATATGTT CCCCGAATTG CGCGATTTAT GTCATCGTTC CGTTTTGATG GTGTTTATGT CGGATGAGTA CCGCGCCTTC GGCGACGGCC TTTTTCTGGC GCTGGCTGAA ACAACAATGG ATTTCGCCGC GCGCGATCCC GCTCGCGCTG GCGAATATAT TGCGCTGGGA TTCGAAGCGA TGTGGCGCGC GCTGACTCGC GAGGAGCAAT AA
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Protein sequence | MARPKSEDKK QALLEAATQA IAQSGIAAST AVIARNAGVA EGTLFRYFAT KDELINTLYL HLKQDLCQSM IMELDRSITD AKTMTRFIWN SYISWGLNHP ARHRAIRQLA VSEKLTKETE QRADDMFPEL RDLCHRSVLM VFMSDEYRAF GDGLFLALAE TTMDFAARDP ARAGEYIALG FEAMWRALTR EEQ
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