| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0626 |
|---|
| Symbol | |
|---|
| ID | 6483048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 637647 |
|---|
| End bp | 638708 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642736041 |
|---|
| Product | sugar isomerase |
|---|
| Protein accession | YP_002039814 |
|---|
| Protein GI | 194446377 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.371934 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 80 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTAG AAGACTATAT GAACGAGACG CCCCTTCGCC TGCTGGAGAT GCTGACGCAG
ACGCGGGAAG ATCTCTGGCG CGCGGCGCAG GCGCTAACGG AACGCGGCGT CACCCGCATT
ATTCTGACAG GCTCCGGCAC GTCATACCAC GGCGCGCTGA CCGCTCGCGC GTTTATGCAG
CGCTGGTGCG CATTGCCGGT GGATGTCTGC TGGCCGTTTA TGCTTGACGA CGAGACGCTT
GCCCGCAGCG GCAAGGCGCT GGTTGTCGGC ATCTCCCAGG GCGGCGGCAG CCTCTCAACG
CTGGCGGCGA TGGGGCGCGC CCGCAATGTT GGTCATATCA CCGCCTCAAT GGCTGGCGTG
GCGCCTGCGA CTATCGACCG GGCGGCGGAT TATATCCTTA CCGTTCCCTG CGGCGAAGAA
ACCGCTGGCG CGAAAACAAA AGGCTATCAC TGCACGGTTC TCAATTTGAT GCTGCTGGCG
CTCGCCGTCG CCGGGCAGCA ACAGCGGCTG GACGGCGAAC AGCGCCGGTC ACTGCTGCTA
CGGATGGAAA AGACCTTTAA CCACCTGCCC GCGCTGATTA CCGCCTCGCA GGCGTGGGCG
CAAACCAATG CGCTGGCGCT GCGCGATAGC GCAGATATTC GTCTGACCGG CCCGGCAACG
CTGTTCGGTA CGGTGCAGGA GGGTGCGCTC AAGATGCTGG AGACGTTGCG CTGCCCGGTG
TCGGGCTACG AATTCGAGGA GTTTATTCAC GGTATTTACA ATGCCTTTAA TGCGCAATCC
GCACTCATTA TGCTCGACCC GCAGCCTGAC GCGCGTCAGG ATCGGCTGGC GCAAATGCTC
AGTGAGTGGA CGCCGTCTAT TTACCGCATC GGCCCGCAGG TAGAAAATAA TGGTCTGAAT
CTGAATTTCC CGTTTGTCAA TGATGAGGAC TTTGCCGTCT TTGAATATAT CATTCCGCTG
CAAATGCTAT GCGCGATATT ACCCCCGCAA AAAGGCATTA ATCCGGCGAT ACCCAAAGAT
CCGCAATTCC ATCAAAAAAT GAAAAGTAAG CAAGAAATTT AA
|
|---|
| Protein sequence | MQVEDYMNET PLRLLEMLTQ TREDLWRAAQ ALTERGVTRI ILTGSGTSYH GALTARAFMQ
RWCALPVDVC WPFMLDDETL ARSGKALVVG ISQGGGSLST LAAMGRARNV GHITASMAGV
APATIDRAAD YILTVPCGEE TAGAKTKGYH CTVLNLMLLA LAVAGQQQRL DGEQRRSLLL
RMEKTFNHLP ALITASQAWA QTNALALRDS ADIRLTGPAT LFGTVQEGAL KMLETLRCPV
SGYEFEEFIH GIYNAFNAQS ALIMLDPQPD ARQDRLAQML SEWTPSIYRI GPQVENNGLN
LNFPFVNDED FAVFEYIIPL QMLCAILPPQ KGINPAIPKD PQFHQKMKSK QEI
|
|---|
| |