Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0625 |
Symbol | |
ID | 6482407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 636594 |
End bp | 637580 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642736040 |
Product | sugar isomerase |
Protein accession | YP_002039813 |
Protein GI | 194442909 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2222] Predicted phosphosugar isomerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGTTG CTCATGAAAA TGCCCGCCGT ATTATTAGCG ATATTTTAGG TAAACAAAAC ATTGAACGCG TCTGGTTTGT CGGCTGCGGC GGTTCATTAA CCGGCTTCTG GCCAGGGAAA TACTTTCTGG ACTGTGAAGC GTCAAAACTG GCTGTCGGTT ATATCACCAG TAATGAATTT GTCCACGCCA CACCAAAAGC ATTAGGAAAA AATAGCGTCG TTATTCTCGC CTCGCAGCAG GGCAATACGG CGGAAACCGT CGCAGCCGCC CGCGTGGCGC GTGAAAAAGG GGCGGCGACC ATCGGTCTGG TTTACCAACC TGACACGCCA CTGTGCGAAT ACAGCGACTA CATCATTGAA TATCAGTGGG CGCGTTATCC GGAAACGGTC GACCCTGCAC AACAAAAAGC CGCATACAGC CTGTGGCTGG CGCTGGAAAT TCTCGCCCAA ACAGAGGGCT ATGCGCAATA CGATGAGTTA GTCAGCGCGT TTGGGCGCTT TAGCGACGTT GTTCACGGCG CCCAACGGCA GGTACAAGAA GATGCTCAGC GTTTCGCCGC CGAATGGAAG GATGAGAAGG TGGTCTATAT GATGGGCAGC GGCCCCTCTT TCGGCGCCGC GCATCAAGAG TCTATCTGTA TTCTGCTGGA AATGCAGTGG ATCAACTCCG CCAGCATACA TAGCGGAGAG TATTTCCACG GACCGTTCGA AATCACCGAG CCGGGCACGC CGTTTATATT GCTGCAAAGC AGTGGTCGCA CTCGCCCGCT GGACGATCGT GCGATTCGCT TTATTGAACG CTATCAGGGA AAACTGCAGT TGATCGATGC GGATAAACTC GGCATTCAGG ATCTGTCCAC CGACGTTGGC GAATACTTCT GCGGTCTGTT GCACAACTGT GTGCTGGACG TTTATAACCT CGCTCTGGCG ACAGCCCGTA ATCACCCACT GACCACCCGC CGGTATATGT GGAAAGTTGA ATATTAA
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Protein sequence | MSVAHENARR IISDILGKQN IERVWFVGCG GSLTGFWPGK YFLDCEASKL AVGYITSNEF VHATPKALGK NSVVILASQQ GNTAETVAAA RVAREKGAAT IGLVYQPDTP LCEYSDYIIE YQWARYPETV DPAQQKAAYS LWLALEILAQ TEGYAQYDEL VSAFGRFSDV VHGAQRQVQE DAQRFAAEWK DEKVVYMMGS GPSFGAAHQE SICILLEMQW INSASIHSGE YFHGPFEITE PGTPFILLQS SGRTRPLDDR AIRFIERYQG KLQLIDADKL GIQDLSTDVG EYFCGLLHNC VLDVYNLALA TARNHPLTTR RYMWKVEY
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