Gene SNSL254_A0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0625 
Symbol 
ID6482407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp636594 
End bp637580 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content53% 
IMG OID642736040 
Productsugar isomerase 
Protein accessionYP_002039813 
Protein GI194442909 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2222] Predicted phosphosugar isomerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTTG CTCATGAAAA TGCCCGCCGT ATTATTAGCG ATATTTTAGG TAAACAAAAC 
ATTGAACGCG TCTGGTTTGT CGGCTGCGGC GGTTCATTAA CCGGCTTCTG GCCAGGGAAA
TACTTTCTGG ACTGTGAAGC GTCAAAACTG GCTGTCGGTT ATATCACCAG TAATGAATTT
GTCCACGCCA CACCAAAAGC ATTAGGAAAA AATAGCGTCG TTATTCTCGC CTCGCAGCAG
GGCAATACGG CGGAAACCGT CGCAGCCGCC CGCGTGGCGC GTGAAAAAGG GGCGGCGACC
ATCGGTCTGG TTTACCAACC TGACACGCCA CTGTGCGAAT ACAGCGACTA CATCATTGAA
TATCAGTGGG CGCGTTATCC GGAAACGGTC GACCCTGCAC AACAAAAAGC CGCATACAGC
CTGTGGCTGG CGCTGGAAAT TCTCGCCCAA ACAGAGGGCT ATGCGCAATA CGATGAGTTA
GTCAGCGCGT TTGGGCGCTT TAGCGACGTT GTTCACGGCG CCCAACGGCA GGTACAAGAA
GATGCTCAGC GTTTCGCCGC CGAATGGAAG GATGAGAAGG TGGTCTATAT GATGGGCAGC
GGCCCCTCTT TCGGCGCCGC GCATCAAGAG TCTATCTGTA TTCTGCTGGA AATGCAGTGG
ATCAACTCCG CCAGCATACA TAGCGGAGAG TATTTCCACG GACCGTTCGA AATCACCGAG
CCGGGCACGC CGTTTATATT GCTGCAAAGC AGTGGTCGCA CTCGCCCGCT GGACGATCGT
GCGATTCGCT TTATTGAACG CTATCAGGGA AAACTGCAGT TGATCGATGC GGATAAACTC
GGCATTCAGG ATCTGTCCAC CGACGTTGGC GAATACTTCT GCGGTCTGTT GCACAACTGT
GTGCTGGACG TTTATAACCT CGCTCTGGCG ACAGCCCGTA ATCACCCACT GACCACCCGC
CGGTATATGT GGAAAGTTGA ATATTAA
 
Protein sequence
MSVAHENARR IISDILGKQN IERVWFVGCG GSLTGFWPGK YFLDCEASKL AVGYITSNEF 
VHATPKALGK NSVVILASQQ GNTAETVAAA RVAREKGAAT IGLVYQPDTP LCEYSDYIIE
YQWARYPETV DPAQQKAAYS LWLALEILAQ TEGYAQYDEL VSAFGRFSDV VHGAQRQVQE
DAQRFAAEWK DEKVVYMMGS GPSFGAAHQE SICILLEMQW INSASIHSGE YFHGPFEITE
PGTPFILLQS SGRTRPLDDR AIRFIERYQG KLQLIDADKL GIQDLSTDVG EYFCGLLHNC
VLDVYNLALA TARNHPLTTR RYMWKVEY