Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0621 |
Symbol | |
ID | 6484901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 630042 |
End bp | 631289 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642736036 |
Product | small conductance mechanosensitive ion channel transporter |
Protein accession | YP_002039809 |
Protein GI | 194444678 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 0.841631 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGAAT TGATATCCCG GGTAGAAGAT TTAGCGGGAA TTGAAATGAA TCACACCACG TCGCTGGTGG TGATATTTGG TATTATTTTT CTGACAGCAG TTGTCGTGCA TATTATTTTG CACTGGATAG TACTGCGCGC TTTCGAAAAA CGCGCCATCG CCAGTTCCCG CCTGTGGCTG CAAATTATTA CCCAGAATAA ATTATTCCAT CGTCTGGCTT TTACGCTGCA AGGCATCATT GTCAATATTC AGGCCGCGCT CTGGCTACAA AAAGGCAGTG AGGCAGCGGA TATCCTGACG ACCTGCGCGC AGTTATGGAT TATGACCTAC GCCCTGCTGT CGTTATTTTC CTTGCTGGAC GTGATTTTCA ATCTATCGCA AAAATGGCCC GCCGCCTCTC AGTTACCGCT AAAAGGAATA TTTCAGGGTA TTAAGCTCAT CGGCGCAATT ATCGTCGGCA TTCTGATGAT CTCACTGCTG ATTGGCCAGT CACCAGCAAT TTTAATCAGC GGGCTGGGCG CGATGGCCGC GGTATTAATG CTGGTCTTTA AAGACCCGAT TCTTGGCCTG GTTGCCGGTA TCCAGCTTTC CGCCAACGAT ATGCTCAAAC TAGGCGACTG GCTGGAAATG CCGAAATATG GCGCAGATGG CGCGGTCATT GATATTGGCT TAACCACGGT AAAAGTACGC AACTGGGATA ATACCATCAC CACCATTCCC ACCTGGTCGC TGGTTTCCGA CTCATTCAAA AACTGGAGCG GCATGTCTGC GTCCGGCGGA CGCCGGATTA AACGCAGCAT TAATATTGAC GCGACCAGTA TCCATTTTCT GGATGATGAT GAAAAACAGC GGCTGTTAAC CGCGCAACTG TTAAAGCCGT ACCTTACCAG CCGTCATCAG GAAATCGATG AATGGAATAA ACAACTGGAT GCGCCGGAAT CAGCCTTAAA TCACCGCCGC ATGACCAATA TCGGGACATT TCGCGCCTAT CTGAACGAAT ATTTACGCCA CCATCCGCGC ATCCGTAAAG ACATGACGCT GATGGTACGC CAACTGGCGC CTGACGATCA TGGTTTGCCG ATAGAGATCT ACGCCTTTAC CAATACCGTC GTGTGGCTGG AATATGAGAG CATTCAGGCC GATATTTTCG ACCATATTTT TGCCGTGGTG GAAGAGTTTG GCTTGCGTAT TCATCAGACG CCGACCGGCA GCGATATTCG CGCGCTGTCA GGGACATTGC GGCATTAA
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Protein sequence | MQELISRVED LAGIEMNHTT SLVVIFGIIF LTAVVVHIIL HWIVLRAFEK RAIASSRLWL QIITQNKLFH RLAFTLQGII VNIQAALWLQ KGSEAADILT TCAQLWIMTY ALLSLFSLLD VIFNLSQKWP AASQLPLKGI FQGIKLIGAI IVGILMISLL IGQSPAILIS GLGAMAAVLM LVFKDPILGL VAGIQLSAND MLKLGDWLEM PKYGADGAVI DIGLTTVKVR NWDNTITTIP TWSLVSDSFK NWSGMSASGG RRIKRSINID ATSIHFLDDD EKQRLLTAQL LKPYLTSRHQ EIDEWNKQLD APESALNHRR MTNIGTFRAY LNEYLRHHPR IRKDMTLMVR QLAPDDHGLP IEIYAFTNTV VWLEYESIQA DIFDHIFAVV EEFGLRIHQT PTGSDIRALS GTLRH
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