Gene SNSL254_A0618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0618 
Symbol 
ID6483054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp626466 
End bp627026 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content51% 
IMG OID642736033 
Producthypothetical protein 
Protein accessionYP_002039806 
Protein GI194442272 
COG category[S] Function unknown 
COG ID[COG3059] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.525105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAT ATCTTCGTCT GTTAAGTCAG GGGGATCGGC TAGGATTAAC ATTAATTCGC 
CTGAGTATCG CCATCGTTTT TATCTGGATT GGACTACTAA AATTTGTGCC CTATGAGGCA 
GACAGTATTA CCCCGTTTGT GGCGAACAGT CCGTTTATGT CTTTTTTCTA TGAACATCCT 
GAAGAATATC GTCAGCATCT GACTCATGAG GGCGAACTAA AACCGGAGGA ACGCGCCTGG 
CAAACCGCCA ATAATACGTA TGCGTTTTCG GATGGTCTGG GCGTGGTGGA ATTGATTATC 
GCGGCGCTGG TACTGGCTAA CCCTGTCAGC CGCTGGTTAG GGCTGGCGGG CGGCGTGCTG 
GCATTCCTGA CGCCATTTGT CACGCTGTCG TTTTTAATCA CCACGCCGGA GGCCTGGGTT 
ATGCCGCTGG GCGATGCGCA TTATGGTTTT CCGTATTTAT CGGGCGCCGG GCGGCTGGTA 
TTAAAAGATA CGTTAATGCT GGCAGGAGCG GTGATGATCA TGGCGGACTC CGCCCGTTCG 
TTACTTTTAC AGCGCCAGTA G
 
Protein sequence
MDKYLRLLSQ GDRLGLTLIR LSIAIVFIWI GLLKFVPYEA DSITPFVANS PFMSFFYEHP 
EEYRQHLTHE GELKPEERAW QTANNTYAFS DGLGVVELII AALVLANPVS RWLGLAGGVL 
AFLTPFVTLS FLITTPEAWV MPLGDAHYGF PYLSGAGRLV LKDTLMLAGA VMIMADSARS 
LLLQRQ