Gene SNSL254_A0608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0608 
Symbol 
ID6483802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp620852 
End bp621772 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content44% 
IMG OID642736025 
Productglycosyl transferase 
Protein accessionYP_002039798 
Protein GI194443593 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.163631 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCT CTCTTGTCGT TCCAGTTTTT AATGAAGAAG ACACGATACC GATTTTCTAT 
AAAACGGTAC GTGAGTTTAA TGAACTAAAA GAATATGAAG TGGAGATCGT TTTTATTAAT
GACGGAAGCA AAGATGCAAC TGAATCAATA ATTAACAAAA TAGCTGCATC TGATCCGCTC
GTTATTCCGC TTTCGTTTAC GCGAAACTTC GGTAAAGAAC CTGCTCTTTT CGCGGGGCTC
GACCACGCAA CCGGGGATGC GGTCATTCCT ATTGATGTCG ATTTACAGGA TCCGATAGAA
GTTATCCCCC ATCTCATTGA GAAGTGGCAG GCTGGCGCAG ATATGGTGCT GGCTAAGCGC
TCAGACCGCT CAACTGACGG GCGCATGAAG CGTAAGACAG CTGAGTGGTT TTATAAGCTG
CACAACAAAA TCAGCAATCC GAAAATCGAA GAGAACGTTG GCGATTTTCG GTTAATGAGT
CGTGAAGTTG TCGAAAATAT TAAATTAATG CCCGAACGCA ACTTGTTCAT GAAGGGTGTG
CTGAGTTGGG TTGGGGGACA CAGTGATGTT GTGGAGTATG CGCGCGCGCA ACGTGTGGCT
GGCAACACTA AATTCAACGG ATGGAAGCTA TGGAATCTGG CGATAGAAGG TATAACTAGC
TTCTCAACTT TTCCTCTGCG TATGTGGACC TATATCGGTC TGGTTGTCGC AGGAATGGCT
TTTATTTACG GGGCGTGGAT GATTTTGGAT ACGCTCGCCT TCGGAAACCC AGTAAGAGGA
TATCCTTCAT TACTCGTCTC CATACTTTTC CTTGGAGGGG TGCAGTTGAT AGGGATAGGC
GTGCTGGGAG AATATATTGG CAGAATTTAT ATTGAAACCA AAAAACGTCC AAAATATTTA
CTTAAGGATA TTAAAAAATG A
 
Protein sequence
MKISLVVPVF NEEDTIPIFY KTVREFNELK EYEVEIVFIN DGSKDATESI INKIAASDPL 
VIPLSFTRNF GKEPALFAGL DHATGDAVIP IDVDLQDPIE VIPHLIEKWQ AGADMVLAKR
SDRSTDGRMK RKTAEWFYKL HNKISNPKIE ENVGDFRLMS REVVENIKLM PERNLFMKGV
LSWVGGHSDV VEYARAQRVA GNTKFNGWKL WNLAIEGITS FSTFPLRMWT YIGLVVAGMA
FIYGAWMILD TLAFGNPVRG YPSLLVSILF LGGVQLIGIG VLGEYIGRIY IETKKRPKYL
LKDIKK