Gene SNSL254_A0605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0605 
Symbol 
ID6482912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp617086 
End bp617682 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content42% 
IMG OID642736022 
Productfimbriae W protein 
Protein accessionYP_002039796 
Protein GI194442310 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.579681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.099042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGTA TCGCTATTAA GGAACAAAAC AGTCACTTTG AGCATGGTTT GAAAATCATC 
ATGACGCGTC TGGCGAATCA ATGGCAGCAG AAAATTGACT TTCTGCCGCC AGAAGAGATA 
GATAATGCCG ATATCGCTTT CCTGGCCCTG GATGATGATT GGTTCAGCGC AGGCTGTTAC 
CAGATACCTA TGCATACCCA ACATCAGCTA CGGGTGATTA TTTGTAATAA ATGCGATAAA 
GAAAAGCTCA TGTTCAGACC ATGTCTGTAT ATGCTGCCGC ATATTTATCG GGAAGATGAT 
GTTGAAGAAA TTACCCGGAA AATGATATTG ATCTTACATA AACGAGCGCT TCGACATAGC 
GTCCCTTCTG GCATTTGCCA CTACTGCACG ACTCGTCATT TTTCAGTAAC AGAACGTCAC 
CTGTTAAAAC TGATCGCCAG CGGTTATCAT TTAAGCGAAA CGGCCGCTTT ACTTTCACTT 
TCTGAAGAGC AGACAAAGTC ACTCCGCCGG AGCATTATGC GAAAATTACA TGTTAAAACG 
GAGCAGCAGT TTTTAAAATA TATTAGAGTT AACCTTCATT TCTTACTCAG TAAGTAA
 
Protein sequence
MLSIAIKEQN SHFEHGLKII MTRLANQWQQ KIDFLPPEEI DNADIAFLAL DDDWFSAGCY 
QIPMHTQHQL RVIICNKCDK EKLMFRPCLY MLPHIYREDD VEEITRKMIL ILHKRALRHS 
VPSGICHYCT TRHFSVTERH LLKLIASGYH LSETAALLSL SEEQTKSLRR SIMRKLHVKT 
EQQFLKYIRV NLHFLLSK