Gene SNSL254_A0591 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0591 
Symbol 
ID6482953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp604945 
End bp605769 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content52% 
IMG OID642736008 
Producthypothetical protein 
Protein accessionYP_002039782 
Protein GI194443408 
COG category[S] Function unknown 
COG ID[COG4727] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0613255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.0623591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGGT TCGCGTTTGC CCTGTGGCTC AGCGCAATCT CGCTCAACGC TTATGCAGAC 
AGTGCTAACT GTCACCAAAA AGCAAACACG CCGGAGAGCA TCGCAGCGAC AATGGATCAG
GCGCTACAGC TCAAACAACA GCTTAACAGT CAATCCGATC CGGTCGTCAT TCTGGTTCGC
CAGGGGCAAG ATATGTCGAG CCGACATTTA ACCTGGTCAC ATGCTGGCTA TGCCATGCGC
CAGCCAAACG GAGACTGGCG GGTTTACCAT AATCTGAATA CTTGCAGAAC CGCTGAATCA
GCGCTCTATA TACAAGGTCT GTATGAGTTT CTGGCTGATG ACCTGGTGAA TCAGAGCATT
GCCGTTTTGC GCCCGCGTTC AGATATCGCG ACGGCATTAC AAACGCTCTT ACATAGCGCT
ATCAAACTCA ATCTCTTCCA CAGTCCCCGC TATAACCTGA TTGCGTGGCC TTTCTCCGGC
CCTTATCAGA ATTCGAATGG CTGGCTTCTC GAAGTGTTTG CGCGAGCAAA CGATGCGCAG
GTTTGGTCAC GTAATGATGC CCGCCGCTGG TTGCAGCTTC AGGGTTATCA ACCCTCTATC
GTTAGTGCTG GCACTTTTGA ACGATTAGGC GCAAAACTGT TCACCCCTAA CGTTTTCACC
GACGATCAGC CAGCAGAATT GCTGCGAAAA GGAGATGTGG GGCTAAACAG CGGCGACAGC
GTCATCCGCT TTATTGCCCA TTACAGCCGG GCAATACCCG GGTGTGAACA TCAGAATCTG
GGGGAGTCGG TGTGTGTTTA TCTTTCGCCC GGTGCGAAAA AATAA
 
Protein sequence
MKRFAFALWL SAISLNAYAD SANCHQKANT PESIAATMDQ ALQLKQQLNS QSDPVVILVR 
QGQDMSSRHL TWSHAGYAMR QPNGDWRVYH NLNTCRTAES ALYIQGLYEF LADDLVNQSI
AVLRPRSDIA TALQTLLHSA IKLNLFHSPR YNLIAWPFSG PYQNSNGWLL EVFARANDAQ
VWSRNDARRW LQLQGYQPSI VSAGTFERLG AKLFTPNVFT DDQPAELLRK GDVGLNSGDS
VIRFIAHYSR AIPGCEHQNL GESVCVYLSP GAKK