Gene SNSL254_A0587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0587 
SymbolpurE 
ID6482353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp601497 
End bp602006 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content60% 
IMG OID642736004 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_002039778 
Protein GI194442908 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.51944 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.08578 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCCC GCAATAATCC GGCGCGTGTC GCCATCGTGA TGGGGTCCAA AAGCGACTGG 
GCTACCATGC AATTCGCCGC CGAAATTTTT GAAATTCTGG ATGTCCCGCA CCATGTAGAA
GTGGTTTCCG CTCATCGCAC CCCCGATAAA CTGTTCAGCT TCGCCGAAAC GGCGGAAGAG
AACGGATATC AAGTGATTAT TGCCGGCGCG GGCGGCGCGG CGCACCTGCC GGGAATGATT
GCGGCAAAAA CGCTGGTCCC GGTACTCGGC GTGCCGGTAC AAAGCGCTGC GCTAAGCGGC
GTGGATAGCC TTTACTCCAT TGTGCAGATG CCGCGCGGCA TTCCGGTGGG TACACTGGCG
ATCGGTAAAG CCGGTGCCGC TAACGCCGCC CTGCTCGCCG CACAGATTCT GGCGCAACAC
GACGCGGAAC TGCATCAGCG CATCGCCGAC TGGCGCAAAG CGCAAACCGA TGAAGTTCTG
GAAAATCCCG ATCCGCGGGG GACGCTATGA
 
Protein sequence
MSSRNNPARV AIVMGSKSDW ATMQFAAEIF EILDVPHHVE VVSAHRTPDK LFSFAETAEE 
NGYQVIIAGA GGAAHLPGMI AAKTLVPVLG VPVQSAALSG VDSLYSIVQM PRGIPVGTLA
IGKAGAANAA LLAAQILAQH DAELHQRIAD WRKAQTDEVL ENPDPRGTL