| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0578 |
|---|
| Symbol | |
|---|
| ID | 6483863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 591095 |
|---|
| End bp | 592243 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642735995 |
|---|
| Product | glycerate kinase II |
|---|
| Protein accession | YP_002039769 |
|---|
| Protein GI | 194445092 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1929] Glycerate kinase |
|---|
| TIGRFAM ID | [TIGR00045] glycerate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 0.837942 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTG TAATTGCGCC AGATTCATTT AAAGAGAGCT TAAGCGCTGA TAAATGCTGT
CAGGCTATTA AAGCGGGATT TTCAACCGTA TTTCCTGATG CGCGCTATGT CTGTTTACCG
ATCGCCGATG GTGGAGAAGG AACCGTGGAC GCGATGGTAG CAGCGACCGG CGGGAAACGG
GTTTCTGTGG ACGTTAGCGG GCCGATGGGG GAAAAAGTAA ACGGATTTTA TGGCCTGACC
GGCGACGGCA AAACGGCGAT TATTGAAATG GCGGCGGCGA GCGGATTGAT GCTGGTGGCG
CCCGAGGCGC GTAATCCGCT GCTGGCATCC AGTTTCGGCA CCGGCGAATT GATTCGTCAC
GCCCTGGACG CGGGGATTCG CCATATTATT CTGGGTATCG GCGGCAGCGC CACGGTGGAT
GGCGGAATGG GAGTAGCGCA GGCGCTCGGT GTGCGTTTTC TGGACGCGCA AGGAACGCCG
CTTGGCGCCG GAGGGGGCAA TTTATCGCGC CTGGCGAGCA TTGACCTGCA GGGGTGCGAT
CCGCGAATTT CAGAGTGTCG TATTGAGGTC GCCTGTGATG TTGATAACCC GTTGGTGGGG
CCACGCGGCG CGGCGGCGGT ATTCGGTCCG CAGAAAGGGG CGACGCCTGA AATGGTTGAG
ACGCTGGAAA ATGGATTACG TAATTATGCC CGTGTTTTAC ATGCCCTGAC CGGACGCGAC
ATGTCTCAAA TACCGGGCGG TGGAGCGGCC GGAGGAATGG GGATTGCTGC TATCGTCTTC
CTGGAAGCGG AAATGAAGCC CGGTATTGAG ATTGTTATGC AGGCGGTGAA GCTGGAGGAG
GCGGTAAAAG AGGCCTCGCT GGTGATTACC GGAGAAGGGC GAATCGACTC GCAAACGGCG
GGAGGAAAAG CGCCGATAGG CGTCGCGTCA GTGGCGAAAC GGCATCATGT CCCGGTTATC
GGCATTGCCG GCGTACTGGG CGACGGCGTG GAAGTGGTCC ATCGCCACGG TATTGATGCA
GTATTCAGTA TTTTGCCGCG GCTGGCGCCT TTGCCGGAAG TTCTGGCGAA CGGTGAACAA
AATCTCTACC ACAGCGCCTG TAATATTGCC CGCGTCATCA AACTTGGCCA GGACATCGGG
ACTCGTTAA
|
|---|
| Protein sequence | MKIVIAPDSF KESLSADKCC QAIKAGFSTV FPDARYVCLP IADGGEGTVD AMVAATGGKR
VSVDVSGPMG EKVNGFYGLT GDGKTAIIEM AAASGLMLVA PEARNPLLAS SFGTGELIRH
ALDAGIRHII LGIGGSATVD GGMGVAQALG VRFLDAQGTP LGAGGGNLSR LASIDLQGCD
PRISECRIEV ACDVDNPLVG PRGAAAVFGP QKGATPEMVE TLENGLRNYA RVLHALTGRD
MSQIPGGGAA GGMGIAAIVF LEAEMKPGIE IVMQAVKLEE AVKEASLVIT GEGRIDSQTA
GGKAPIGVAS VAKRHHVPVI GIAGVLGDGV EVVHRHGIDA VFSILPRLAP LPEVLANGEQ
NLYHSACNIA RVIKLGQDIG TR
|
|---|
| |