| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0575 |
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| Symbol | ncs1 |
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| ID | 6483291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 586821 |
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| End bp | 588275 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642735992 |
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| Product | allantoin permease |
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| Protein accession | YP_002039766 |
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| Protein GI | 194444865 |
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| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.240762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.88047 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACATC AAAGAGAGCT ATACCAGCAG CGCGGTTATA GCGAAGACTT ATTACCTAAA
ACAGAAACCC AACGAAACTG GAAGGCATTT AACTATTTCA CCTTATGGAT GGGATCTGTA
CATAACGTGC CAAATTACGT TATGGTCGGC GGTTTTTTTA TACTGGGCCT ATCAACATTT
AATATCATGT TGGCCATTAT TATCAGCGCA TTATTTATTG CGGCGGCGAT GGTAATGAAT
GGCGCGGCAG GCAGCAAATA TGGCGTTCCT TTTGCTATGA TATTGCGAGG TTCTTACGGC
GTCCGCGGCG CGCTATTCCC TGGATTATTG CGAGGGGGAA TCGCGGCAAT TATGTGGTTC
GGCTTACAGT GTTACGCGGG ATCGCTGGCA TTTCTTATTT TGATTGGGAA GATCTGGCCA
GGATTTCTGA CATTAGGCGG AGATTTCAAG CTGCTGGGTC TTTCACTGCC AGGACTAATT
ACTTTTCTAA TTTTTTGGAT TATTAACGTT GGCATCGGTT TTGGCGGTGG TAAAGTATTA
AATAAATTTA CCGCTATCCT CAATCCATGT ATTTACATTG TCTTTGGCGG CATGGCTATT
TGGGCAATAT CGCTGGTCGG CATTGGCCCG ATTCTGGACT ATCTGCCTTC AGGCGTGCAA
AAAGCAGAGC ACAGCGGCTT TCTGTTCCTG GTGGTGATTA ACGCCGTAGT CGCCGTCTGG
GCAGCGCCAG CGGTGAGCGC GTCCGATTTC ACGCAAAACG CGCATTCATT TCGCGCTCAG
GCATTGGGAC AAACGCTGGG GCTTATCGTA GCGTATATAT TATTCGCCGT AGCCAGCGTG
TGCATTATTG CCGGAGCCAG TATTCATTAT GGTATGGATA CCTGGAACGT GCTGGATATT
GTGCAGCGCT GGGACAGCCT GTTTGCTTCA TTCTTTGCGG TGTTGGTGAT TCTGATGACG
ACAATTTCAA CCAACGCCAC CGGTAATATT ATACCTGCGG GGTATCAAAT TGCGGCGCTT
GCCCCGACAA AGCTTAACTA TAAAAATGGC GTAATGATTG CCAGTATTAT CAGTCTACTG
ATTTGTCCAT GGAAATTAAT GGAGAATCAG GACAGTATTT ATCTGTTCCT CGATATTATC
GGCGGTATGC TTGGCCCGGT AATCGGCGTA ATGTTAGCTC ATTATTTTGT GGTAATGCGT
GGAAAAATTA ATCTTGATGA GCTGTACACC GCCAGCGGTG ATTACAAATA TTATGATAAT
GGATTTAACC TGACTGCATT TTCAGTCACC CTGGTCGCAG TTATTCTGTC ATTAGGCGGC
AAGTTTATAC CATTTTTGGA GCCTTTATCC CGCGTGTCCT GGTTTGTAGG CGTAATAGTT
GCGTTCGTTA CTTATGCGCT ATTGAAGAAA CGCACGGGTT TTGAAAATAC AGGAGAGAAA
AAACTCGCAG GTTAA
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| Protein sequence | MEHQRELYQQ RGYSEDLLPK TETQRNWKAF NYFTLWMGSV HNVPNYVMVG GFFILGLSTF
NIMLAIIISA LFIAAAMVMN GAAGSKYGVP FAMILRGSYG VRGALFPGLL RGGIAAIMWF
GLQCYAGSLA FLILIGKIWP GFLTLGGDFK LLGLSLPGLI TFLIFWIINV GIGFGGGKVL
NKFTAILNPC IYIVFGGMAI WAISLVGIGP ILDYLPSGVQ KAEHSGFLFL VVINAVVAVW
AAPAVSASDF TQNAHSFRAQ ALGQTLGLIV AYILFAVASV CIIAGASIHY GMDTWNVLDI
VQRWDSLFAS FFAVLVILMT TISTNATGNI IPAGYQIAAL APTKLNYKNG VMIASIISLL
ICPWKLMENQ DSIYLFLDII GGMLGPVIGV MLAHYFVVMR GKINLDELYT ASGDYKYYDN
GFNLTAFSVT LVAVILSLGG KFIPFLEPLS RVSWFVGVIV AFVTYALLKK RTGFENTGEK
KLAG
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