| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0573 |
|---|
| Symbol | |
|---|
| ID | 6482529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 584534 |
|---|
| End bp | 585412 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642735990 |
|---|
| Product | 2-hydroxy-3-oxopropionate reductase |
|---|
| Protein accession | YP_002039764 |
|---|
| Protein GI | 194443819 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01505] 2-hydroxy-3-oxopropionate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGG GATTTATTGG CCTGGGAATT ATGGGCTCGC CAATGGCTAT CAATTTGGCA
CGCGCCGGTC ATCAATTACA CGTTACGACT ATTGGTCCGG TCGCGGACGA ACTGCTCTCG
CTGGGGGCGG TAAATGTTGA GACTGCACGT CAGGTAACTG AATTTGCAGA CATTATCTTC
ATAATGGTGC CGGATACGCC GCAGGTTGAA GAGGTGTTAT TTGGCGAACA CGGTTGCGCC
AAAACATCGC TTCAGGGAAA AACCATCGTC GATATGAGTT CTATTTCTCC TATCGAAACC
AAACGTTTTG CCCAGCGCGT TAATGAAATG GGCGCTGATT ACCTGGATGC CCCGGTTTCC
GGGGGAGAAA TCGGGGCGCG TGAAGGCACT CTGTCGATTA TGGTCGGCGG CGAGCAGAAA
GTCTTTGACC GCGTTAAACC GCTCTTTGAC ATCCTGGGAA AAAATATCAC CCTGGTGGGC
GGCAATGGGG ATGGGCAAAC CTGTAAGGTG GCTAACCAAA TTATTGTTGC GCTGAATATT
GAAGCGGTTT CTGAAGCCTT AGTGTTTGCT TCAAAAGCAG GCGCCGATCC GGTACGCGTG
CGCCAGGCGT TAATGGGCGG GTTCGCCTCT TCACGCATTC TGGAAGTTCA CGGCGAGCGG
ATGATCAACC GGACGTTCGA GCCTGGTTTC AAAATCGCGC TTCATCAGAA AGACCTTAAT
CTTGCATTGC AAAGCGCAAA AGCGCTGGCG CTGAATTTAC CGAATACGGC GACCTGCCAG
GAATTATTCA ATACCTGTGC GGCAAATGGC GGGAGCCAGC TTGATCATTC GGCAATGGTA
CAGGCGCTGG AATTAATGGC CAATCATAAA TTGTCCTAA
|
|---|
| Protein sequence | MKLGFIGLGI MGSPMAINLA RAGHQLHVTT IGPVADELLS LGAVNVETAR QVTEFADIIF
IMVPDTPQVE EVLFGEHGCA KTSLQGKTIV DMSSISPIET KRFAQRVNEM GADYLDAPVS
GGEIGAREGT LSIMVGGEQK VFDRVKPLFD ILGKNITLVG GNGDGQTCKV ANQIIVALNI
EAVSEALVFA SKAGADPVRV RQALMGGFAS SRILEVHGER MINRTFEPGF KIALHQKDLN
LALQSAKALA LNLPNTATCQ ELFNTCAANG GSQLDHSAMV QALELMANHK LS
|
|---|
| |