Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0571 |
Symbol | gcl |
ID | 6484262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 581863 |
End bp | 583644 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642735988 |
Product | glyoxylate carboligase |
Protein accession | YP_002039762 |
Protein GI | 194442880 |
COG category | [R] General function prediction only |
COG ID | [COG3960] Glyoxylate carboligase |
TIGRFAM ID | [TIGR01504] glyoxylate carboligase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAA TGAGAGCCGT GGATGCGGCA ATGTATGTGC TGGAAAAAGA AGGTATCACC ACAGCATTCG GCGTTCCTGG GGCTGCAATC AACCCCTTCT ATTCTGCAAT GCGTAAGCAT GGAGGCATTC GCCATATACT GGCGCGTCAT GTGGAAGGCG CTTCGCATAT GGCTGAGGGC TACACACGTG CGGCGGCAGG TAATATTGGG GTCTGCCTGG GCACTTCCGG CCCGGCGGGA ACCGACATGA TCACCGCGCT CTATTCCGCT TCTGCCGACT CCATCCCGAT TTTATGCATT ACCGGCCAGG CGCCACGAGC GCGTCTGCAC AAGGAAGATT TCCAGGCAGT CGATATTGAA GCGATTGCAA AACCAGTCAG CAAGATGGCA GTGACGGTTC GTGAGGCGGC GCTGGTGCCG CGCGTATTAC AACAGGCTTT TCATCTGATG CGCTCAGGCC GCCCAGGTCC TGTGCTGGTT GATTTACCGT TTGATGTCCA GGTTGCGGAG ATCGAATTCG ATCCGGATAT GTATGAGCCG CTGCCGGTAT ATAAGCCAGC CGCCAGCCGC GTACAGATTG AAAAGGCGCT GGAGATGCTG ATTCAGTCCG AGCGTCCGGT AATTGTCGCG GGCGGCGGGG TTATTAACGC CGACGCCGCG CCACTGCTGC AGCAGTTTGC CGAACTGACC AGCGTACCGG TGATCCCTAC TCTGATGGGC TGGGGCTGTA TCCCGGACGA TCACCCCTTA ATGGCGGGGA TGGTCGGCCT GCAAACGGCG CATCGCTACG GCAACGCCAC TCTGCTGGCA TCTGATATGG TTTTTGGCAT CGGTAACCGT TTCGCCAACC GTCATACGGG GTCCGTTGAG AAATATACTC AGGGGCGAAA AATCATCCAT ATCGATATTG AACCGACGCA AATTGGCCGC GTGTTGTGCC CGGATCTGGG CATCGTTTCG GACGCCAAAG CGGCGCTAAC GTTGCTGATC GATGTCGCGC AGGAGATGCA AAAGGCGGGG CGTTTGCCAT GCCGGAAGAC CTGGGTGGAC GAATGCCAGC AGCGTAAACG GACTTTGCTG CGTAAAACTC ACTTTGACAA CGTGCCAGTG AAGCCGCAGC GCGTCTATGA AGAGATGAAC AAAGCCTTTG GTCGCGATGT GTGCTATGTC ACCACCATTG GATTGTCGCA AATCGCGGCA GCGCAGATGC TGCATGTGTT TAAAGACAGA CACTGGATCA ACTGCGGCCA GGCGGGGCCT CTTGGCTGGA CAATCCCGGC GGCATTAGGG GTTTGTGCTG CCGATCCGCA ACGCAATGTG GTGGCGATTT CCGGCGATTT CGACTTCCAG TTCCTGATTG AAGAGTTAGC CGTCGGCGCG CAGTTTAACA TCCCGTATAT CCATGTGCTG GTTAACAACG CTTATCTTGG TCTGATTCGC CAGTCGCAAC GCGCATTTGA CATGGACTAT TGCGTGCAGC TCGCCTTTGA AAATATCAAT TCCAGCGAAG TGAATGGCTA TGGCGTTGAC CATGTAAAAG TGGCAGAAGG GTTAGGCTGT AAAGCAATTC GTGTCTTTAA ACCGGAAGAT ATTGCGCCTG CATTTGAACA AGCTAAAGCG CTGATGGCGC AATATCGCGT TCCGGTGGTG GTGGAAGTCA TTCTGGAACG CGTAACCAAT ATTTCCATGG GCAGCGAACT GGATAACGTA ACCGAGTTTG AAGAAGTTGC GGATAGTGCG AAAGATGCGC CAACAGAAAC CTGTTTTATG AAATATGAGT AA
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Protein sequence | MAKMRAVDAA MYVLEKEGIT TAFGVPGAAI NPFYSAMRKH GGIRHILARH VEGASHMAEG YTRAAAGNIG VCLGTSGPAG TDMITALYSA SADSIPILCI TGQAPRARLH KEDFQAVDIE AIAKPVSKMA VTVREAALVP RVLQQAFHLM RSGRPGPVLV DLPFDVQVAE IEFDPDMYEP LPVYKPAASR VQIEKALEML IQSERPVIVA GGGVINADAA PLLQQFAELT SVPVIPTLMG WGCIPDDHPL MAGMVGLQTA HRYGNATLLA SDMVFGIGNR FANRHTGSVE KYTQGRKIIH IDIEPTQIGR VLCPDLGIVS DAKAALTLLI DVAQEMQKAG RLPCRKTWVD ECQQRKRTLL RKTHFDNVPV KPQRVYEEMN KAFGRDVCYV TTIGLSQIAA AQMLHVFKDR HWINCGQAGP LGWTIPAALG VCAADPQRNV VAISGDFDFQ FLIEELAVGA QFNIPYIHVL VNNAYLGLIR QSQRAFDMDY CVQLAFENIN SSEVNGYGVD HVKVAEGLGC KAIRVFKPED IAPAFEQAKA LMAQYRVPVV VEVILERVTN ISMGSELDNV TEFEEVADSA KDAPTETCFM KYE
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