Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0570 |
Symbol | |
ID | 6484214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 580960 |
End bp | 581778 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642735987 |
Product | DNA-binding transcriptional repressor AllR |
Protein accession | YP_002039761 |
Protein GI | 194444258 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGAAG TAAGACGACG CGGCAGGCCA GGACAGGCAG AGCCGACTGC GCAGAAAGGC GCTCAGGCGC TGGAGAGGGG CATAGCGATA TTGCAATATC TCGAAAGAAG CGGCGGCAGT TCATCAGTTA GCGATATTTC CGGCAGCCTG GATTTACCGC TTTCTACGAC GTTTCGCCTG TTAAAGGTAC TGCAAGCGGC TGATTTTGTG TACCAGGATA GCCAGCTTGG CTGGTGGCAT ATTGGTTTAG GCGTATTTAA TGTGGGCTCT GCGTATATTC ATAATCGCGA TGTCCTCTCG GTGGCCGGAC CCTTTATGCA CCGACTTATG CTGCTTTCTG GCGAGACGGT CAACGTAGCG ATTCGCAACG GTAATGAAGC GGTGTTAATC GGTCAAAAGG AGTGCAAATC GATGGTCAGA ATGTGCGCGC CCTTAGGGAG TCGTCTGCCG TTACATGCTT CCGGCGCCGG AAAAGCGCTG CTTTACCCGC TCACCGAAGA AGAGCTGGTG GGGATCGTCG TCAATACCGG TTTGCGGCGG TTTACGCCGA CCACTCTGGT GGATTTACCT ATCCTGCTTA AAAATCTGGA GCAGGCGCGT GAACAGGGCT ACACCGTCGA CCAGGAAGAA CATGTTGTCG GGCTGAATTG TATCGCCTCC GCTATCTATG ACGATGCGGG CAGCGTGGTC GCCGCTATCT CGATATCGGG ACCGGCTTCC CGGCTGACGG AAGATCGCTT TATCAGCCAG GGTGAACTGG TACGGGATAC CGCGAAAGAC ATCAGTACGG CGCTTGGGCT AAAACCCCCT GTAGCCTGA
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Protein sequence | MTEVRRRGRP GQAEPTAQKG AQALERGIAI LQYLERSGGS SSVSDISGSL DLPLSTTFRL LKVLQAADFV YQDSQLGWWH IGLGVFNVGS AYIHNRDVLS VAGPFMHRLM LLSGETVNVA IRNGNEAVLI GQKECKSMVR MCAPLGSRLP LHASGAGKAL LYPLTEEELV GIVVNTGLRR FTPTTLVDLP ILLKNLEQAR EQGYTVDQEE HVVGLNCIAS AIYDDAGSVV AAISISGPAS RLTEDRFISQ GELVRDTAKD ISTALGLKPP VA
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