Gene SNSL254_A0570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0570 
Symbol 
ID6484214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp580960 
End bp581778 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content55% 
IMG OID642735987 
ProductDNA-binding transcriptional repressor AllR 
Protein accessionYP_002039761 
Protein GI194444258 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAG TAAGACGACG CGGCAGGCCA GGACAGGCAG AGCCGACTGC GCAGAAAGGC 
GCTCAGGCGC TGGAGAGGGG CATAGCGATA TTGCAATATC TCGAAAGAAG CGGCGGCAGT
TCATCAGTTA GCGATATTTC CGGCAGCCTG GATTTACCGC TTTCTACGAC GTTTCGCCTG
TTAAAGGTAC TGCAAGCGGC TGATTTTGTG TACCAGGATA GCCAGCTTGG CTGGTGGCAT
ATTGGTTTAG GCGTATTTAA TGTGGGCTCT GCGTATATTC ATAATCGCGA TGTCCTCTCG
GTGGCCGGAC CCTTTATGCA CCGACTTATG CTGCTTTCTG GCGAGACGGT CAACGTAGCG
ATTCGCAACG GTAATGAAGC GGTGTTAATC GGTCAAAAGG AGTGCAAATC GATGGTCAGA
ATGTGCGCGC CCTTAGGGAG TCGTCTGCCG TTACATGCTT CCGGCGCCGG AAAAGCGCTG
CTTTACCCGC TCACCGAAGA AGAGCTGGTG GGGATCGTCG TCAATACCGG TTTGCGGCGG
TTTACGCCGA CCACTCTGGT GGATTTACCT ATCCTGCTTA AAAATCTGGA GCAGGCGCGT
GAACAGGGCT ACACCGTCGA CCAGGAAGAA CATGTTGTCG GGCTGAATTG TATCGCCTCC
GCTATCTATG ACGATGCGGG CAGCGTGGTC GCCGCTATCT CGATATCGGG ACCGGCTTCC
CGGCTGACGG AAGATCGCTT TATCAGCCAG GGTGAACTGG TACGGGATAC CGCGAAAGAC
ATCAGTACGG CGCTTGGGCT AAAACCCCCT GTAGCCTGA
 
Protein sequence
MTEVRRRGRP GQAEPTAQKG AQALERGIAI LQYLERSGGS SSVSDISGSL DLPLSTTFRL 
LKVLQAADFV YQDSQLGWWH IGLGVFNVGS AYIHNRDVLS VAGPFMHRLM LLSGETVNVA
IRNGNEAVLI GQKECKSMVR MCAPLGSRLP LHASGAGKAL LYPLTEEELV GIVVNTGLRR
FTPTTLVDLP ILLKNLEQAR EQGYTVDQEE HVVGLNCIAS AIYDDAGSVV AAISISGPAS
RLTEDRFISQ GELVRDTAKD ISTALGLKPP VA