Gene SNSL254_A0561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0561 
Symbol 
ID6482500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp570251 
End bp570865 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content53% 
IMG OID642735977 
Productmultifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 
Protein accessionYP_002039751 
Protein GI194444315 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.868884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCA ACACTGTTTT CCGCTGGCAT TTGCCCTTCC TGTTTTTGAT CCTGTTAACT 
TTCCGTGCCG CCGCCGCAGA CACCTTATTA ATTCTGGGCG ATAGCCTCAG CGCCGGTTAC
CGTATGGCCG CCAGCGCGGC ATGGCCGTCG CTCCTTAATG ATAAATGGCA AAACAAAACG
TCGGTCGTTA ATGCCAGTAT AAGCGGTGAT ACCTCGCAGC AGGGACTGGC GCGTTTGCCG
GCGCTGTTGC AACAGCATCA CCCGCGCTGG GTAGTGGTGG AACTTGGCGG CAACGATGGC
CTACGCGGTT TTGCGCCTGC GCAAACCGAA CAGACGCTAC GCAAAATCAT TCAGACGGTG
AAAGCCGCCG ATGCCCAACC GTTACTGATG CAAATTCATC TGCCCGCTAA CTACGGTCGC
CGTTATAATG AATCCTTTAG CGCCATTTAT CCTAAGCTCG CCAAAGAGTT CGATATTCCT
CTGTTACCGT TTTTTATGGA AGAGGTATAT CTGAAACCGC AGTGGATGCA GGATGACGGC
ATTCATCCCA ACCGCGACGC CCAGCCGTTT ATTGCCGACT GGATGGCGAA GCAGTTGACC
CCTTTTCTCT CCTGA
 
Protein sequence
MNFNTVFRWH LPFLFLILLT FRAAAADTLL ILGDSLSAGY RMAASAAWPS LLNDKWQNKT 
SVVNASISGD TSQQGLARLP ALLQQHHPRW VVVELGGNDG LRGFAPAQTE QTLRKIIQTV
KAADAQPLLM QIHLPANYGR RYNESFSAIY PKLAKEFDIP LLPFFMEEVY LKPQWMQDDG
IHPNRDAQPF IADWMAKQLT PFLS