| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0557 |
|---|
| Symbol | |
|---|
| ID | 6485962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 567547 |
|---|
| End bp | 568326 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642735974 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002039748 |
|---|
| Protein GI | 194446215 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0390] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00245] conserved hypothetical protein TIGR00245 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.711318 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 84 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAGC ATAATATTAC CAATACCTCG CTGGCGTTAT CGATGCTGCT GGTGGTGGTC
GCGATGCTCA TCAGTCACAA GGAAAAGCTG GCGCTGGAAA AAGATATTCT GTGGAGCGTA
TGCCGGGCGG TGATACAGCT CATTATTGTC GGCTATGTAC TGAAATACAT CTTTGGCGTT
AATCATGCCG CCCTGACGCT ACTGATGGTG CTGTTCATCT GTTTTAACGC CGCATGGAAC
GCGCAAAAGC GCAGTAAATA TATCGATAAG GCATTTCTCT CCTCGTTTAT CGCCATCACC
GTCGGCGCCG GACTAACGCT GACGGTACTG GTGCTTACCG GTTCGATTGA ATTTGCGCCG
ATGCAGGTGA TTCCCATCGC TGGCATGGTC GCCGGCAATG CGATGGTGGC GGTAGGGCTG
TGCTACAACC AACTGGGGCT GCGTTTTCAC AGCGAGCAGC AGCAAATCCA GGAAAAATTA
AGTTTGGGCG CAACGCCGAA AATGGCCTCC GCCGGGCTTA TCCGCGATAG CATCCGCGCA
TCGCTTATCC CGACGATCGA CTCGGCAAAG ACCGTTGGGC TGGTGAGCCT GCCGGGGATG
ATGTCCGGGC TGATTTTTGC CGGGATCGAT CCGGTAAAAG CGATTAAATA TCAAATTATG
GTAACGTTTA TGCTGTTGTC GACAGCCAGC CTGTCTACCA TCATTGCCTG TTATTTAACC
TACCGGAAGT TCTATAATTC GCGTCATCAG TTGGTAGTGA TGCCGCTCAA GAAATCATGA
|
|---|
| Protein sequence | MNEHNITNTS LALSMLLVVV AMLISHKEKL ALEKDILWSV CRAVIQLIIV GYVLKYIFGV
NHAALTLLMV LFICFNAAWN AQKRSKYIDK AFLSSFIAIT VGAGLTLTVL VLTGSIEFAP
MQVIPIAGMV AGNAMVAVGL CYNQLGLRFH SEQQQIQEKL SLGATPKMAS AGLIRDSIRA
SLIPTIDSAK TVGLVSLPGM MSGLIFAGID PVKAIKYQIM VTFMLLSTAS LSTIIACYLT
YRKFYNSRHQ LVVMPLKKS
|
|---|
| |