Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0552 |
Symbol | copA |
ID | 6484343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 562342 |
End bp | 564843 |
Gene Length | 2502 bp |
Protein Length | 833 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642735969 |
Product | copper exporting ATPase |
Protein accession | YP_002039743 |
Protein GI | 194445285 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase [COG2608] Copper chaperone |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 87 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCAAA CTATCGACCT GACCCTGGAC GGTTTGTCCT GCGGTCATTG CGTTAAACGC GTGAAAGAAA GTCTTGAACA ACGTCCGGAT GTTGAGCTGG CGGACGTCAC CGTAACCGAA GCGCACGTTA CCGGTACCGC CAGTGCGGAC GCGTTAATTG AAACCATCAA ACAAGCCGGG TATGGCGCGA CGTTAAGCCA CCCAAAGGCT AAACCGCTGA CAGAGTCATC AATCCCGTCG GAAGCACTGG CAGCGGTTCC TCATGAGCTT CCGGTAGCGA CGGCCGATGA AGAAAGCCAA CAGTTGCTGT TAAGCGGCAT GAGCTGCGCC AGTTGTGTCA CCCGCGTACA ACATGCGCTA CAAAGCGTAC CGGGCGTCAC GCAGGCACGG GTAAACCTGG CGGAACGCAC TGCGCTGGTG ATGGGCAGCG CGTCCGCCGC TGATTTAGTG CAGGCGGTGG AAAAAGCCGG CTACGGCGCA GAGGCGATTG AAGATGACAT CAAACGCCGC GAGCGCCAGC AGGAAACCGC CATCGCCACC ATGAAACGTT TTCGCTGGCA GGCCATCGTC GCCCTGGCGG TCGGTATACC GGTCATGGTC TGGGGGATGA TCGGCGATAA CATGATGGTG ACCGGCGACA ACCGCAGCCT GTGGCTGGCT ATTGGCCTGA TCACGCTTGC GGTGATGGTC TTTGCGGGCG GTCACTTTTA CCGTAACGCG TGGAAAAGCC TGCTGAACGG CACGGCGACG ATGGATACGC TGGTGGCGCT CGGCACCGGG GTCGCCTGGC TCTACTCCAT GAGCGTCAAC CTGTGGCCGC AGTGGTTCCC GATGGAAGCG CGGCACCTCT ATTACGAAGC CAGCGCGATG ATTATCGGTC TGATTAATCT CGGACACATG CTGGAAGCGC GCGCCCGTCA GCGTTCCTCA AAAGCGCTGG AAAAATTACT CGATCTCACC CCGCCCACCG CACGCGTCGT GACAGAAGAC GGCGAAAAAA GCGTCCCGCT GGCGGACGTT CAGCCAGGGA TGCTGCTGCG GCTCACTACC GGCGATCGCG TGCCGGTGGA TGGCGAAATT ACCCAGGGCG AAGCGTGGCT TGATGAAGCC ATGCTGACCG GCGAACCTAT TCCGCAGCAA AAAGGCGAAG GCGACAGCGT TCATGCCGGC ACCGTCGTCC AGGACGGCAG CGTCCTGTTC CGCGCCAGCG CGGTGGGCAG TCATACCACG CTGTCACGCA TTATTCGCAT GGTACGCCAG GCACAAAGCA GTAAACCGGA AATTGGCCAA CTGGCCGATA AAATCTCCGC GGTATTCGTT CCCGTCGTCG TGGCCATTGC GCTGTTCAGC GCCGCTATCT GGTATTTCTT CGGGCCGGCG CCGCAAATTG TTTATACGCT GGTCATCGCC ACCACCGTAC TGATTATCGC CTGCCCTTGC GCATTAGGCC TGGCGACGCC AATGTCGATT ATTTCCGGCG TAGGCCGCGC TGCCGAATTC GGCGTGCTGG TACGCGACGC CGATGCCCTG CAACGCGCCA GTACGTTGGA TACCCTCGTT TTTGATAAAA CCGGGACGCT GACGGAAGGC AAGCCGCAAG TGGTGGCGAT AAAAACCTTT AACGGCGTTG AGGAAGCTCA GGCATTACGT CTGGCTGCCG CGCTCGAACA AGGCTCCAGC CACCCGCTGG CCCATGCGAT TCTGGAAAAA GCCGGCGATG ATAAACTGCC GCAGGTGAAC GGTTTCAGAA CGCTGCGCGG ACTGGGCGTC AGCGGTGAAG CGGAAGGTCA TCAACTGCTT CTGGGGAACC AGGCGTTGCT GAACGAACAG CACGTCGCCA CGGATGACAT GACGGCGGAA ATCACCGCGC AGGCCTCGCA AGGCTCGACT CCGGTCCTGC TGGCGATTGA CGGTAAAGCG GCGGCGTTAC TGGCGGTACG CGATCCATTG CGCAGCGATA GTATTGCCGC GCTTGAACGC CTGCACAACG CCGGATACCG TCTGGTAATG CTCACCGGGG ATAACCCAAC GACGGCTAAC GCGATTGCCA AAGAAGCGGG TATTGATGAA GTGATTGCGG GCGTTCTGCC GGATGGCAAA GCCGATGCGA TTAAACGTCT GCAAAGCCAG GGTCGTCAGG TTGCGATGGT CGGCGATGGT ATCAACGATG CGCCCGCGCT GGCGCAGGCG GACGTCGGTA TCGCGATGGG CGGCGGCAGC GATGTGGCAA TTGAAACCGC GGCGATTACG CTGATGCGCC ATAGTCTGAT GGGCGTGGCG GATGCGCTGG CCATTTCGCG CGCGACGTTG CGCAATATGA AACAAAACCT GCTTGGCGCA TTTATCTACA ACAGCATTGG TATCCCGGTG GCCGCCGGTA TTCTGTGGCC GTTTACCGGT ACCTTGTTAA ACCCGGTAGT AGCGGGCGCG GCAATGGCGC TGTCTTCCAT TACCGTCGTC AGCAATGCCA ACCGGCTATT GCGTTTTAAA CCGAAAGCGT AA
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Protein sequence | MSQTIDLTLD GLSCGHCVKR VKESLEQRPD VELADVTVTE AHVTGTASAD ALIETIKQAG YGATLSHPKA KPLTESSIPS EALAAVPHEL PVATADEESQ QLLLSGMSCA SCVTRVQHAL QSVPGVTQAR VNLAERTALV MGSASAADLV QAVEKAGYGA EAIEDDIKRR ERQQETAIAT MKRFRWQAIV ALAVGIPVMV WGMIGDNMMV TGDNRSLWLA IGLITLAVMV FAGGHFYRNA WKSLLNGTAT MDTLVALGTG VAWLYSMSVN LWPQWFPMEA RHLYYEASAM IIGLINLGHM LEARARQRSS KALEKLLDLT PPTARVVTED GEKSVPLADV QPGMLLRLTT GDRVPVDGEI TQGEAWLDEA MLTGEPIPQQ KGEGDSVHAG TVVQDGSVLF RASAVGSHTT LSRIIRMVRQ AQSSKPEIGQ LADKISAVFV PVVVAIALFS AAIWYFFGPA PQIVYTLVIA TTVLIIACPC ALGLATPMSI ISGVGRAAEF GVLVRDADAL QRASTLDTLV FDKTGTLTEG KPQVVAIKTF NGVEEAQALR LAAALEQGSS HPLAHAILEK AGDDKLPQVN GFRTLRGLGV SGEAEGHQLL LGNQALLNEQ HVATDDMTAE ITAQASQGST PVLLAIDGKA AALLAVRDPL RSDSIAALER LHNAGYRLVM LTGDNPTTAN AIAKEAGIDE VIAGVLPDGK ADAIKRLQSQ GRQVAMVGDG INDAPALAQA DVGIAMGGGS DVAIETAAIT LMRHSLMGVA DALAISRATL RNMKQNLLGA FIYNSIGIPV AAGILWPFTG TLLNPVVAGA AMALSSITVV SNANRLLRFK PKA
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