Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0550 |
Symbol | |
ID | 6486968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 560481 |
End bp | 561275 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642735967 |
Product | GumN family protein |
Protein accession | YP_002039741 |
Protein GI | 194446252 |
COG category | [S] Function unknown |
COG ID | [COG3735] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.234425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 94 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGCTAT TAAATCAACT TAAACGTTTA TGGCGCGCGC TGCGTGGTAC CCCAAATAGT TGGCCTGCTA TCGATCTCTC CCTGCCCGGT GGTCGTCATC TGCATCTGGT TGGCAGTATC CATATGGGAA CGCGCGATAT GGCTCCTCTT CCAGCAAAGC TGGTGAAAAA GCTACGCCAG GCCGATGCGC TGGTCGTTGA AGCGGATATT TCTGGTAACG AAACGCCATT CAGCAATCTC CCCAAATGCC CGCCGTTGGT CGAACGTCTC AGCGCCGGGC AGCTAAGCGC ACTGGAAAAA CGGGTCAGCG AGTTGGGTAT GCCGCTGATC CATTTTGATA ATCAACCTTT ATGGCAGATA GCTATGGTGC TACAGGCCAC GCAGGCGCAA CGGCTGGGAT TGCGCCCGGA CTATGGCATT GATTATCAGC TATTACAGGC TGCCCGCGAA ATGTCGCTGC CGGTACAAGA GCTGGAAGGG GCGAAACACC AGCTCGAACT ACTCTGCGAT CTGCCCGATG GCGGGATGGC GCTGCTCGAC GACACGCTGA CGCACTGGCA CACCAACGCA CGGCTTTTGC AGGTGATGAT CGGCTGGTGG CTTGAGCAGC CGCCGACCAG CGTCGGCGCT TCGCTCCCCA GAACGTTTAG CCAGCCGCTG TATGATGTAC TGATGGTGAA ACGCAATGAA GCCTGGCGCG ACGCGCTGCT GGCACTGCCG CCGGGACGCT ACGTGGTAGC CGTAGGGGCG CTACATCTGT ACGGCGAAGG CAACCTACCG CAAATATTGA AATAA
|
Protein sequence | MELLNQLKRL WRALRGTPNS WPAIDLSLPG GRHLHLVGSI HMGTRDMAPL PAKLVKKLRQ ADALVVEADI SGNETPFSNL PKCPPLVERL SAGQLSALEK RVSELGMPLI HFDNQPLWQI AMVLQATQAQ RLGLRPDYGI DYQLLQAARE MSLPVQELEG AKHQLELLCD LPDGGMALLD DTLTHWHTNA RLLQVMIGWW LEQPPTSVGA SLPRTFSQPL YDVLMVKRNE AWRDALLALP PGRYVVAVGA LHLYGEGNLP QILK
|
| |