Gene SNSL254_A0550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0550 
Symbol 
ID6486968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp560481 
End bp561275 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content57% 
IMG OID642735967 
ProductGumN family protein 
Protein accessionYP_002039741 
Protein GI194446252 
COG category[S] Function unknown 
COG ID[COG3735] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.234425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones94 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTAT TAAATCAACT TAAACGTTTA TGGCGCGCGC TGCGTGGTAC CCCAAATAGT 
TGGCCTGCTA TCGATCTCTC CCTGCCCGGT GGTCGTCATC TGCATCTGGT TGGCAGTATC
CATATGGGAA CGCGCGATAT GGCTCCTCTT CCAGCAAAGC TGGTGAAAAA GCTACGCCAG
GCCGATGCGC TGGTCGTTGA AGCGGATATT TCTGGTAACG AAACGCCATT CAGCAATCTC
CCCAAATGCC CGCCGTTGGT CGAACGTCTC AGCGCCGGGC AGCTAAGCGC ACTGGAAAAA
CGGGTCAGCG AGTTGGGTAT GCCGCTGATC CATTTTGATA ATCAACCTTT ATGGCAGATA
GCTATGGTGC TACAGGCCAC GCAGGCGCAA CGGCTGGGAT TGCGCCCGGA CTATGGCATT
GATTATCAGC TATTACAGGC TGCCCGCGAA ATGTCGCTGC CGGTACAAGA GCTGGAAGGG
GCGAAACACC AGCTCGAACT ACTCTGCGAT CTGCCCGATG GCGGGATGGC GCTGCTCGAC
GACACGCTGA CGCACTGGCA CACCAACGCA CGGCTTTTGC AGGTGATGAT CGGCTGGTGG
CTTGAGCAGC CGCCGACCAG CGTCGGCGCT TCGCTCCCCA GAACGTTTAG CCAGCCGCTG
TATGATGTAC TGATGGTGAA ACGCAATGAA GCCTGGCGCG ACGCGCTGCT GGCACTGCCG
CCGGGACGCT ACGTGGTAGC CGTAGGGGCG CTACATCTGT ACGGCGAAGG CAACCTACCG
CAAATATTGA AATAA
 
Protein sequence
MELLNQLKRL WRALRGTPNS WPAIDLSLPG GRHLHLVGSI HMGTRDMAPL PAKLVKKLRQ 
ADALVVEADI SGNETPFSNL PKCPPLVERL SAGQLSALEK RVSELGMPLI HFDNQPLWQI
AMVLQATQAQ RLGLRPDYGI DYQLLQAARE MSLPVQELEG AKHQLELLCD LPDGGMALLD
DTLTHWHTNA RLLQVMIGWW LEQPPTSVGA SLPRTFSQPL YDVLMVKRNE AWRDALLALP
PGRYVVAVGA LHLYGEGNLP QILK