Gene SNSL254_A0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0542 
Symbol 
ID6486654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp552270 
End bp553241 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content56% 
IMG OID642735960 
Productacetyl esterase 
Protein accessionYP_002039734 
Protein GI194446022 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.750594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones98 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCGG AAAATAAAAT TCCCGTACTC ACCCGACTGT CAGACGAAAT GAAAGCCGTC 
GTAAACTTCC AGCAACCAGG CCTTCCCCCC TGGCCTGCCG ATGGCGATAT TGAGACCCAG 
CGTCAGTATT ATCTTCTTGA GCGCCGTTTC TGGAATGCCG ACGCGCCGTC CATGACCACC 
CGCACCTGCG CCGTCCCTAC GCCTTATGGC GATGTAACAA CCCGGCTCTA CTCGCCGCAG 
CCGACCAGCC AGGCCACCTT ATACTATCTG CACGGCGGCG GATTTATCCT CGGTAACCTG 
GATACGCATG ACCGGATAAT GCGTCTGCTG GCGCGTTATA CCGGCTGCAC CGTGATCGGC 
ATTGATTATT CGCTGTCGCC GCAAGCGCGT TATCCACAGG CCATTGAAGA AACCGTCGCG 
GTATGCAGCT ACTTCTCTCA ACATGCCGAT GAATACTCGC TCAACGTGGA GAAAATCGGT 
TTCGCCGGAG ATTCCGCAGG CGCCATGCTG GCGCTTGCCA GCGCGCTCTG GCTACGTGAT 
AAGCACATTC GCTGCGGTAA CGTTATCGCG ATTCTGTTGT GGTATGGGCT GTATGGGTTG 
CAAGATTCGG TAAGCCGCCG TCTGTTCGGC GGCGCGTGGG ACGGCCTGAC GCGTGAAGAT 
CTGGACATGT ACGAAAAGGC CTATCTGCGT AACGATGAAG ATCGGGAATC GCCCTGGTAT 
TGTCTGTTTA ATAACGATCT CACGCGCGAT GTGCCGCCCT GCTTTATTGC CAGCGCGGAG 
TTTGATCCGC TCATTGATGA CAGCCGCTTG CTGCACCAGA CATTACAGGC GCACCAGCAG 
CCCTGCGAAT ACAAAATGTA TCCCGGCACA CTGCACGCCT TCCTGCACTA TTCGCGAATG 
ATGACAATCG CCGACGATGC CTTGCAGGAC GGCGCACGCT TCTTTATGGC GAGGATGAAG 
ACGCCGCGTT AA
 
Protein sequence
MKPENKIPVL TRLSDEMKAV VNFQQPGLPP WPADGDIETQ RQYYLLERRF WNADAPSMTT 
RTCAVPTPYG DVTTRLYSPQ PTSQATLYYL HGGGFILGNL DTHDRIMRLL ARYTGCTVIG 
IDYSLSPQAR YPQAIEETVA VCSYFSQHAD EYSLNVEKIG FAGDSAGAML ALASALWLRD 
KHIRCGNVIA ILLWYGLYGL QDSVSRRLFG GAWDGLTRED LDMYEKAYLR NDEDRESPWY 
CLFNNDLTRD VPPCFIASAE FDPLIDDSRL LHQTLQAHQQ PCEYKMYPGT LHAFLHYSRM 
MTIADDALQD GARFFMARMK TPR