Gene SNSL254_A0529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0529 
Symbol 
ID6486165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp542327 
End bp543262 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content53% 
IMG OID642735948 
Producthypothetical protein 
Protein accessionYP_002039722 
Protein GI194442277 
COG category[S] Function unknown 
COG ID[COG5464] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01784] conserved hypothetical protein (putative transposase or invertase) 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones97 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGTC TACCCACCAC GCCGCACGAT GCGGTATTTC GACAGATGCT GATGCAAAAA 
GAGGTCGCCC GCGACTTTCT GGCTATCCAC TTGCCAGAAG ACTTTCTTGC AATCTGCGAT
CTGGATTCAC TGAAGCTGGA GTCGGGGAGT TTTGTTGAAG ACAATTTACG CAGCCGCTAT
TCAGATATTC TCTACTCTCT GCATCCCCAA CACGGCCCCG GGTATGTTTA CGCGCTCATT
GAACATCAGA GCAAATCAGA CCGGCTGATG GCTTTTCGCC TGATGCGGTA CGCCATTGCC
GCCATGCAGC GTCATCTGGA TGCCGGTCAT GATACCTTGC CGCTGGTGGT ACCAATCCTT
TTTTATCACG GTCCGGAAAG CCCGTGGCCC TATAGCCTTA ACTGGCATAA TATGTTTGTG
AAACCGGATA TGGCGAAGGC CTTATACAGC CGCGATTTTG CGCTGGTCGA CCTGACGACA
ATGCCGGATA ATCAGCTTTT GCAGCATCGG CGGATAGCGA TGTTAGAGCT CCTGCAAAAA
CATATTCGTC AACGCGATTT AAGCGAACTG CTCGACCCCC TTATCACGCT TTTAACGCAG
GATCATTTGA CGGACGCGCA GCTCAGTGTG CTGATCAACT ATATGTTGAA AGCAGGAAAC
GCCGCAGAAC CCGGGGCGCT AATTCGTCAA CTGGCGCAGG GCGCGCCGCA GTATAAGGAA
CAACTGATGA CAATAGCGGA ATGGCTGGAA GAAAAAGGCC GAACGGAAGG GTTGCAAAAG
GGCCTGCAAA AAGGCCTTGA GCAAGGGTTA GCACAAGGCC GTGAGGCCGA AGCGCGCGCT
ATTGCCCGCA AAATGCTTGC CAACGGGCTG GAACCTGGGC TCATCGCCAG CGTCACCGGC
ATTACGCCGG AAGAGCTTTC TACGCTGTCG CATTAG
 
Protein sequence
MERLPTTPHD AVFRQMLMQK EVARDFLAIH LPEDFLAICD LDSLKLESGS FVEDNLRSRY 
SDILYSLHPQ HGPGYVYALI EHQSKSDRLM AFRLMRYAIA AMQRHLDAGH DTLPLVVPIL
FYHGPESPWP YSLNWHNMFV KPDMAKALYS RDFALVDLTT MPDNQLLQHR RIAMLELLQK
HIRQRDLSEL LDPLITLLTQ DHLTDAQLSV LINYMLKAGN AAEPGALIRQ LAQGAPQYKE
QLMTIAEWLE EKGRTEGLQK GLQKGLEQGL AQGREAEARA IARKMLANGL EPGLIASVTG
ITPEELSTLS H