| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0528 |
|---|
| Symbol | |
|---|
| ID | 6483290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 538923 |
|---|
| End bp | 542285 |
|---|
| Gene Length | 3363 bp |
|---|
| Protein Length | 1120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642735947 |
|---|
| Product | potassium efflux protein KefA |
|---|
| Protein accession | YP_002039721 |
|---|
| Protein GI | 194446103 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3264] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 91 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTATGT TGCAGCTTTA TAAACGTTCA CAGCATTTTG TTTTTATTAC AATTAGCGTC
CTTATTATCT TGCTGTCCTG TCAGTCTCTG GCATTTGCCC GGGGGCAAAC GAATGGCGAC
CTGCCGTCAA AAGCGGATGT GCAAAACCAG CTGGATACGC TGAATAAGCA AAAAGATCTC
TCCGCCCAGG ATAAGCTCGT CCAGCAGGAC CTTATTGATA CGTTAGCTAC GCTGGAGAAA
ATCGAGCGGG TGAAAGAGGA GACCGTACAG CTACGGCAGA AGGTGGCGCA GGCGCCTGAA
AAAATGCGTC AGGCGACGGC TGCGTTGAAT GCGCTGAGCG ACGTCGATAA TGATGATGAA
ATGCGAAAAA CGCTGAGTGC GCTTTCGCTA CGTCAGCTTG AGCTGCGCGT GGCGCAGGTA
CTGGATGATT TGCAAAATTC GCAAAACGAT CTTGCCGCTT ATAACAGCCA GCTTGTTTCG
CTACAGACCC AGCCTGAGCG CGTGCAAAAC GCCATGTATA CCGCCTCACA GCAAATACAG
CAAATCCGTA ACCGTCTGGA CGGCAATAAC GTCGGCGAAG CCGCGCTTCG CCCCAGCCAA
CAGGTGTTAT TACAGGCACA ACAGGCGCTG CTTAATGCGC AGATCGACCA GCAACGTAAG
AGTCTTGAAG GAAATACCGT TTTGCAGGAC ACCCTGCAAA AACAGCGAGA TTACGTGACG
GCCAACAGTA ATCGCCTTGA ACATCAGCTT CAACTTTTAC AGGAGGCGGT CAACAGTAAA
CGACTTACGC TAACGGAAAA AACGGCCCAG GAGGCTATTT CGCCGGACGA AACGGCGCGT
ATCCAGGCGA ACCCGCTGGT AAAACAGGAA CTGGATATTA ACCATCAACT CAGCCAGCGT
CTGATTGTCG CGACCGAAAA CGGCAATATG TTGATGCAGC AAAACATTAA AGTAAAAAAC
TGGCTCGATC GCGCGCTGCA ATCGGAAAGA AATATCAAAG AACAGATTGC CGTCTTAAAA
GGCAGCCTGT TGCTGTCGCG TATTCTTTAT CAACAGCAGC AAACTCTGCC CTCCGCCGAC
GAACTCGAAG ATATGACCAA CCGCATTGCG GATTTGCGTC TGGAGCAGTT TGAAATCAAC
CAGCAGCGTG ATGCCTTATT CCAAAGCGAT GCCTTTGTCG ACAAGCTGGA GGAGGGGCAT
ACCAGCGAGG TGAATGATGA AGTTCATGAT GCGTTGCTTC AGGTGGTGGA GATGCGCCGT
GAGCTATTGG ATCAGCTAAA TAAACAGTTG GGTAACCAGC TGATGATGGC GATTAACCTG
CAAGTTAACC AGCAGCAGTT GATGAGCGTC TCGAAAAATC TGAAAGCCAT TCTGACGCAG
CAGATTTTTT GGGTGAACAG TAACCGCCCT ATGGACTGGG ACTGGCTTAA AGCGTTCCCC
CAAACGTTAA AAGAGCAATT CAGCGCCATG AAAATCACGG TGAACTGGCA AAAAGCCTGG
CCCGCGGTAT TTATTGCTTT TTTGGCCGGG TTGCCGCTCT TGCTCATCGC CGGTTTAATC
CGCTGGCGTC TGAAATGGTT AAAAGCGTAT CAACAGAAGC TGGCCGCCGC CGTGGGATCG
CTGCGTAACG ATAGTCAGCT CAATACGCCA AAAGCTATTC TGATCGATCT GATCCGCGCG
CTGCCGGTGT GCCTGATTAT CCTCGCGCTT GGACTGATCC TGCTGACCAT GCAGCTAAAT
ATCAGCGATC TGCTCTGGGC CTTTAGTAAA AAGCTCGCGA TGTTCTGGCT GGTCTTTGGG
CTGTGCTGGA AGGTGCTGGA AAAAGAGGGC GTGGCGATAC GCCATTTTGG TATGCCGGCG
CAGTTGACCA GCCACTGGCG TCGCCAGATT GTACGCATTA GCCTCGCATT GCTGCCGCTG
CACTTTTGGT CTGTGGTGGC GGAGTTGTCG CCGCTGAATC TGATGGATGA CGTGCTGGGG
CAGGCGGTTA TTTTCCTCAA TCTGCTGGTC ATAACATTGC TGGTGTGGCC ACTGTGCCGG
GAAAGCTGGC GCGATAAAGA ATCTCACGGC ATTCGACTGG TGACCGTGAC GATTCTTTCC
ATTATTCCGG TGGCGTTAAT GGTATTAACG GCGACCGGCT ATTTCTATAC CACCCTGCGC
CTGGCGGGGC GCTGGATTGA AACCGTCTAT CTGGTCATTA TCTGGAACCT GCTTTATCAA
ACGGTGCTGC GCGGGTTAAG CGTAGCGGCG CGCCGGATTG CCTGGCGACG CGCGCTGGCT
CGTCGTCAGA ACCTGGTAAA AGAGGGAGCG GAAGGCGCGG AGCCGCAGGA AGAACCCACC
ATCGCGTTGG AGCAGATTAA CCAGCAAACA TTACGTATCA CGATGCTGCT AATGCTTGCC
CTGTTCGGCG TTATGTTCTG GGCGATTTGG TCCGATTTGA TCACCGTATT CAGCTATCTT
GATAGCATCA CGCTGTGGCA CTACAACGGC TCCGAAGCTG GCGCTGCGGT GGTGAAAAGC
GTGACGATGG GCAGCTTGCT ATTCGCCATT ATTGCCGCGA TGGTGGCCTG GGCGCTCATC
CGCAACTTAC CCGGCCTGTT GGAAGTGCTG GTGCTTTCAC GCCTCAATAT GCGCCAGGGG
GCTTCGTATG CGATCACCAC GATCCTTAAC TACGTCATTA TCGCTGTTGG CGCGATGACG
GTATTCGGAT CGCTCGGCGT CTCGTGGGAT AAACTCCAGT GGCTGGCGGC GGCGTTGTCG
GTGGGTCTCG GTTTTGGGCT ACAGGAGATC TTCGGTAACT TTGTCTCGGG TTTAATCATC
CTCTTCGAAC GTCCGGTACG CATTGGCGAT ACGGTAACGA TCGGCACCTA TTCCGGCACG
GTCAGTAAGA TTCGTATTCG CGCCACCACT ATTACCGATT TTGATCGTAA AGAAGTGATC
ATTCCGAACA AAGCGTTCGT AACGGAGCGG CTGATTAACT GGTCCCTCTC CGATACCACG
ACACGTCTGG TGATCCGGCT TGGCGTGGCT TATGGCTCGG ATCTGGAGAA AGTGAAAAGA
GTCCTGCTAC AGGCGGCGAT GGAGCATCCG AAGGTGATGC ACGATCCGGA ACCTGCCGTA
TTCTTCACCA CCTTTGGCGC CAGCACTCTG GATCATGAAC TGCGTCTGTA CGTGCGTGAA
TTGCGCGATC GTAGCCATAC GGTGGATGAA CTGAACCGCG CGATCGATCG ACTGTGCCGT
GAAAATGATA TCAATATCGC CTTTAACCAG CTTGAGGTGC ATCTGCATAA CGCGAAGGGC
GACGAAGTCA CTGAAGTGAA GCGCGATCTC AACGGCGGCG ATCTGGCGCC TACGGCAAGC
TAA
|
|---|
| Protein sequence | MTMLQLYKRS QHFVFITISV LIILLSCQSL AFARGQTNGD LPSKADVQNQ LDTLNKQKDL
SAQDKLVQQD LIDTLATLEK IERVKEETVQ LRQKVAQAPE KMRQATAALN ALSDVDNDDE
MRKTLSALSL RQLELRVAQV LDDLQNSQND LAAYNSQLVS LQTQPERVQN AMYTASQQIQ
QIRNRLDGNN VGEAALRPSQ QVLLQAQQAL LNAQIDQQRK SLEGNTVLQD TLQKQRDYVT
ANSNRLEHQL QLLQEAVNSK RLTLTEKTAQ EAISPDETAR IQANPLVKQE LDINHQLSQR
LIVATENGNM LMQQNIKVKN WLDRALQSER NIKEQIAVLK GSLLLSRILY QQQQTLPSAD
ELEDMTNRIA DLRLEQFEIN QQRDALFQSD AFVDKLEEGH TSEVNDEVHD ALLQVVEMRR
ELLDQLNKQL GNQLMMAINL QVNQQQLMSV SKNLKAILTQ QIFWVNSNRP MDWDWLKAFP
QTLKEQFSAM KITVNWQKAW PAVFIAFLAG LPLLLIAGLI RWRLKWLKAY QQKLAAAVGS
LRNDSQLNTP KAILIDLIRA LPVCLIILAL GLILLTMQLN ISDLLWAFSK KLAMFWLVFG
LCWKVLEKEG VAIRHFGMPA QLTSHWRRQI VRISLALLPL HFWSVVAELS PLNLMDDVLG
QAVIFLNLLV ITLLVWPLCR ESWRDKESHG IRLVTVTILS IIPVALMVLT ATGYFYTTLR
LAGRWIETVY LVIIWNLLYQ TVLRGLSVAA RRIAWRRALA RRQNLVKEGA EGAEPQEEPT
IALEQINQQT LRITMLLMLA LFGVMFWAIW SDLITVFSYL DSITLWHYNG SEAGAAVVKS
VTMGSLLFAI IAAMVAWALI RNLPGLLEVL VLSRLNMRQG ASYAITTILN YVIIAVGAMT
VFGSLGVSWD KLQWLAAALS VGLGFGLQEI FGNFVSGLII LFERPVRIGD TVTIGTYSGT
VSKIRIRATT ITDFDRKEVI IPNKAFVTER LINWSLSDTT TRLVIRLGVA YGSDLEKVKR
VLLQAAMEHP KVMHDPEPAV FFTTFGASTL DHELRLYVRE LRDRSHTVDE LNRAIDRLCR
ENDINIAFNQ LEVHLHNAKG DEVTEVKRDL NGGDLAPTAS
|
|---|
| |