Gene SNSL254_A0523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0523 
Symbol 
ID6483242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp532528 
End bp532746 
Gene Length219 bp 
Protein Length72 aa 
Translation table11 
GC content40% 
IMG OID642735942 
Producthemolysin expression-modulating protein 
Protein accessionYP_002039716 
Protein GI194443355 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0220013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATA AACCATTAAC TAAAACTGAT TATTTGATGC GTTTACGGCG CTGTCAGACA 
ATTGACACTC TGGAGCGCGT CATTGAGAAA AATAAATATG AATTGTCCGA CAATGAGCTG 
GCTGTATTTT ACTCAGCTGC GGATCACCGT CTTGCAGAAT TGACGATGAA CAAACTCTAC 
GACAAGATCC CCTCTTCAGT ATGGAAATTC ATTCGTTAA
 
Protein sequence
MSDKPLTKTD YLMRLRRCQT IDTLERVIEK NKYELSDNEL AVFYSAADHR LAELTMNKLY 
DKIPSSVWKF IR