Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0506 |
Symbol | |
ID | 6484919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 518627 |
End bp | 519445 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642735926 |
Product | hypothetical protein |
Protein accession | YP_002039700 |
Protein GI | 194444119 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.670453 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 0.663931 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGTC TGGCAGCATT TGATATGGAT GGCACGTTAT TAATGCCTGA TCACCATTTG GGTAGAGAAA CGATCGCCAC GCTGGCGCGT CTGCGCGAAC GCGATATCAC CCTGACATTC GCTACGGGTC GTCATGTGCT GGAGATGCGG CATATTCTGG GGACGCTTTC ACTGGATGCT TATCTTATTA CCGGTAACGG GACGCGAATT CACTCGCTGG AAGGCGACGT GCTGCATCGT CAGGATCTCG ATCCTCAGGT TGCCGATACG GTGATGCACC ATGCCTGGGA TACCCGAGCC AGTATGCATG TGTTTAATGA CAACGGCTGG TTTACAGGCC AGGAGATCCC CGCGCTACTC CAGGCGCACG TCTACAGCGG CTTTCGTTAT CAGGTTATCG ATATAAAAAG TATTCCGGCC CATCAGGTGA CGAAGATCTG TTTTTGCGGC GATCATGACG ATCTGATCCG TTTGCGCATT CAGCTCAATG AGACGCTGGA AGAACGCGCG CACCTCTGTT TCTCTGCCGT CGACTGCCTG GAAGTGCTAC CGCTGGGGTG CAATAAAGGA TCGGCGCTGG CGGTATTGAG CAACCATTTA GGGCTTTCAC TGGCAGATTG CATGGCGTTT GGCGACGCGA TGAACGATCG GGAAATGCTG GGCAGCGTCG GGCGGGGGCT CATTATGGGC AATGCCATGC CGCAGCTTAT CGCCGCGCTG CCACACCTTT CGGTTATCGG ACATTGTGGT AATCAAGCGG TATCACACTT TTTGACGCAT TGGCTGGACA ATCCGCATCT ACCTTATTCC CCCGAATGA
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Protein sequence | MARLAAFDMD GTLLMPDHHL GRETIATLAR LRERDITLTF ATGRHVLEMR HILGTLSLDA YLITGNGTRI HSLEGDVLHR QDLDPQVADT VMHHAWDTRA SMHVFNDNGW FTGQEIPALL QAHVYSGFRY QVIDIKSIPA HQVTKICFCG DHDDLIRLRI QLNETLEERA HLCFSAVDCL EVLPLGCNKG SALAVLSNHL GLSLADCMAF GDAMNDREML GSVGRGLIMG NAMPQLIAAL PHLSVIGHCG NQAVSHFLTH WLDNPHLPYS PE
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