Gene SNSL254_A0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0504 
Symbol 
ID6486215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp516066 
End bp516761 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content53% 
IMG OID642735924 
Productqueuosine biosynthesis protein QueC 
Protein accessionYP_002039698 
Protein GI194445512 
COG category[R] General function prediction only 
COG ID[COG0603] Predicted PP-loop superfamily ATPase 
TIGRFAM ID[TIGR00364] exsB protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.224809 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCG CCGTTGTTGT ATTTAGTGGA GGTCAGGACT CCACCACTTG TCTGGCGCAA 
GCGCGGCATC AGTATGATGA AGTGCATTGT GTCACGTTTG ATTATGGTCA GCGCCACCGC
GCAGAGATTG ATGTCGCGCG CGATCTGGCG TTAAAACTTG GCGCACGCGC GCATAAAGTG
CTGGATGTCA CTTTACTGAA CGAACTGGCG GTCAGTAGCC TGACGCGGGA TAGCATTCCG
GTGCCGGACT ATGAACCGAA CGCTGACGGT ATCCCCAATA CTTTCGTACC GGGACGCAAT
ATTCTCTTTC TGACGCTGGC GGCGATTTAC GCTTATCAGG TCAAAGCCGA AGCGGTGATC
ACCGGCGTTT GCGAGACCGA TTTTTCCGGC TATCCAGACT GTCGCGATGA GTTCGTCAAA
GCGCTGAATC ACGCAGTGAA TCTGGGCATG GCGAAAGATA TCCGTTTCGA AACGCCCCTA
ATGTGGATTG ATAAAGCTGA AACCTGGGCG CTGGCCGATT ATTGGGGCCA ACTGGATTTG
GTTCGCGAAG AGACGCTGAC CTGCTATAAC GGCATTAAAG GCGATGGCTG TGGTCATTGC
GCAGCCTGTA ATCTGCGCGC TAACGGCCTG AATCATTATC TGTCGAATAA AGCGGCGGTG
ATGGCGGCAA TGAAGCAAAA AACCGGGTTA AGGTGA
 
Protein sequence
MKRAVVVFSG GQDSTTCLAQ ARHQYDEVHC VTFDYGQRHR AEIDVARDLA LKLGARAHKV 
LDVTLLNELA VSSLTRDSIP VPDYEPNADG IPNTFVPGRN ILFLTLAAIY AYQVKAEAVI
TGVCETDFSG YPDCRDEFVK ALNHAVNLGM AKDIRFETPL MWIDKAETWA LADYWGQLDL
VREETLTCYN GIKGDGCGHC AACNLRANGL NHYLSNKAAV MAAMKQKTGL R