Gene SNSL254_A0479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0479 
SymbolphnX 
ID6485252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp489728 
End bp490537 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content60% 
IMG OID642735900 
Productphosphonoacetaldehyde hydrolase 
Protein accessionYP_002039674 
Protein GI194446671 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01422] phosphonoacetaldehyde hydrolase
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.34346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.293244 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTA TTCACGCTGT TATTCTCGAC TGGGCGGGCA CCACCGTCGA TTTTGGCTCC 
TTCGCGCCGA CGCAAATTTT CGTCGAGGCG TTCCGTCAGG CATTTGATGT GGAGATCACC
CTCGCCGAAG CACGCGTGCC AATGGGGCTG GGTAAATGGC AACACATTGA AGCGCTGGGA
AAATTACCTG CTGTTGACGC GCGCTGGCAG GCAAAGTTTG GCCGCTCCAT GAGCGCAGCA
GATATTGATG CCATCTACGC CGCTTTCATG CCGTTACAGA TTGCTAAAGT TGTCGATTTT
TCTTCTCCTA TTGCCGGAGT TATCGACACG ATCGCGGCGC TACGAGCCGA GGGCATCAAG
ATAGGCTCCT GCTCCGGTTA CCCACGAGCG GTGATGGAGC GCCTGGTTCC CGCCGCCGCC
GAGCATGGCT ATCGTCCGGA TCATTGGGTA GCAACGGACG ACCTGGCCGC GGGTGGTCGC
CCGGGGCCGT GGATGGCGCT GCAAAACGTG ATTGCGCTGG GCATTGATGC GGTCGCGCAC
TGCGTGAAGG TAGATGATGC CGCGCCGGGC ATTAGCGAGG GGCTTAACGC GGGGATGTGG
ACGGTGGGGC TGGCGGTATC GGGTAACGAA TTCGGCGCAA CATGGGACGC CTATCAGACA
ATGTCGAAAG AGGACGTTGC GGTCCGCCGC GAGCACGCGG CCAGCAAGCT GTACGCCGCC
GGGGCGCATT ACGTGGTGGA TTCACTGGCG GATTTACCTG GGGTGATTGC GCATATTAAT
GCGCGTCTGG CGCAGGGCGA ACGCCCGTAA
 
Protein sequence
MNRIHAVILD WAGTTVDFGS FAPTQIFVEA FRQAFDVEIT LAEARVPMGL GKWQHIEALG 
KLPAVDARWQ AKFGRSMSAA DIDAIYAAFM PLQIAKVVDF SSPIAGVIDT IAALRAEGIK
IGSCSGYPRA VMERLVPAAA EHGYRPDHWV ATDDLAAGGR PGPWMALQNV IALGIDAVAH
CVKVDDAAPG ISEGLNAGMW TVGLAVSGNE FGATWDAYQT MSKEDVAVRR EHAASKLYAA
GAHYVVDSLA DLPGVIAHIN ARLAQGERP