Gene SNSL254_A0473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0473 
SymbolphnV 
ID6486623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp483767 
End bp484564 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content57% 
IMG OID642735894 
Product2-aminoethylphosphonate ABC transport system membrane component PhnV 
Protein accessionYP_002039668 
Protein GI194445703 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID[TIGR03255] 2-aminoethylphosphonate ABC transport system, membrane component PhnV 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAATTT GGTCACCTAA AGGACGCGCA GCGGCGGGCG TTGTGGCTAG CGTACTGTTT 
ATCGTGTTCT TTTTCCTGCC GCTGGCGGTG ATTCTGATGT CCAGCCTTAG CCAGCAGTGG
AACGGTATTC TGCCGAGTGG CTTCACGCTG AACCACTTTG TTAACGCTCT GCACGGTGCG
GCATGGGATG CCCTACTTGC CAGCCTCACG ATTGGCTTTT GCGCCAGCCT GTTTGCGCTG
CTTTGCGGCG TTTGGGCGGC GCTGGCGCTG CGTCAATATG GGGTGAAAAC GCAGAAATGG
TTAAGTATGG TGTTCTATCT GCCGAGTGCG ATTCCGTCAG TGTCCGTGGG CCTGGGCATT
CTGGTTGCTT TCAGCCAGGG GCCATTGCAA ATGAACGGCA CCCTATGGAT TGTGCTGACA
GCGCACTTTG TGCTGATTTC CGCCTTTACC TTCAGTAACG TGTCGACCGG ACTGGCGCGA
ATTTCCGCCG ATATTGAAAA CGTCGCGTCG AGTCTGGGGG CATCGCCCTG GTATCGTCTG
CGTCACGTGA CGTTGCCGTT ATTGATGCCG TGGATGGTGT CAGCGCTGGC GCTGAGTTTA
TCGCTCTCCA TGGGGGAGTT GGGCGCGACG ATGATGATTT ATCCGCCGGG CTGGACGACG
CTGCCGGTAG CTATCTTTAG CCTGACCGAC CGTGGAAATA TTGCCGACGG CGCGGCGCTG
ACCATTGTGC TGGTGGCCAT TACGCTGCTG CTGATGATGA AGCTGGAGCG CATTGCAAAA
CGGTTGGGGC AGAAATAA
 
Protein sequence
MLIWSPKGRA AAGVVASVLF IVFFFLPLAV ILMSSLSQQW NGILPSGFTL NHFVNALHGA 
AWDALLASLT IGFCASLFAL LCGVWAALAL RQYGVKTQKW LSMVFYLPSA IPSVSVGLGI
LVAFSQGPLQ MNGTLWIVLT AHFVLISAFT FSNVSTGLAR ISADIENVAS SLGASPWYRL
RHVTLPLLMP WMVSALALSL SLSMGELGAT MMIYPPGWTT LPVAIFSLTD RGNIADGAAL
TIVLVAITLL LMMKLERIAK RLGQK