Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0447 |
Symbol | |
ID | 6484682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 462475 |
End bp | 463077 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642735869 |
Product | peroxiredoxin-2 |
Protein accession | YP_002039643 |
Protein GI | 194442811 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0190714 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 105 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTACTGG TTACTCGTCA GGCCCCGGAT TTCACCGCTG CGGCGGTACT GGGTAGCGGT GAGATTGTTG ATAAATTCAA CTTCAAACAG CACACCAATG GTAAAACGAC CGTTCTGTTC TTCTGGCCGA TGGACTTCAC TTTTGTTTGC CCGTCTGAGC TGATCGCCTT TGATAAACGT TATGAAGAAT TCCAGAAGCG CGGCGTTGAA GTGGTCGGCG TTTCTTTCGA CTCTGAGTTC GTTCACAACG CATGGCGTAA CACCCCTGTC GATAAAGGCG GCATTGGCCC GGTGAAATAC GCAATGGTCG CCGACGTGAA GCGTGAAATT CAGAAAGCTT ACGGTATCGA ACACCCGGAC GAAGGCGTTG CGCTGCGCGG CTCTTTCCTG ATTGACGCTA ACGGTATTGT TCGCCACCAG GTCGTAAACG ATCTGCCGCT GGGTCGTAAC ATCGACGAAA TGCTGCGTAT GGTCGACGCT CTGCAGTTCC ACGAAGAGCA CGGTGATGTC TGCCCGGCGC AGTGGGAAAA AGGCAAAGAA GGCATGAACG CCTCTCCGGA CGGCGTGGCT AAATACCTGG CTGAGAACAT TTCCAGCCTG TAA
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Protein sequence | MVLVTRQAPD FTAAAVLGSG EIVDKFNFKQ HTNGKTTVLF FWPMDFTFVC PSELIAFDKR YEEFQKRGVE VVGVSFDSEF VHNAWRNTPV DKGGIGPVKY AMVADVKREI QKAYGIEHPD EGVALRGSFL IDANGIVRHQ VVNDLPLGRN IDEMLRMVDA LQFHEEHGDV CPAQWEKGKE GMNASPDGVA KYLAENISSL
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