| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0438 |
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| Symbol | |
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| ID | 6482867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 450643 |
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| End bp | 453783 |
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| Gene Length | 3141 bp |
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| Protein Length | 1046 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642735861 |
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| Product | exonuclease subunit SbcC |
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| Protein accession | YP_002039635 |
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| Protein GI | 194446724 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 95 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTC TCAGTTTGCG TCTGAAAAAC CTGAACTCGC TGAAAGGAGA ATGGAAGGTC
GATTTTACCG CCGAACCGTT TGCCAGTAAC GGGTTATTCG CTATTACCGG CCCGACCGGC
GCGGGAAAAA CCACCTTACT TGACGCCATC TGCCTGGCGC TGTACCACGA AACGCCGCGC
CTGAATACGG TATCGCAGTC ACAAAACGAT TTGATGACGC GCGATACGGC GGAATGTCTG
GCCGAAGTGG AGTTCGAGGT AAAAGGCGAA GCCTGGCGCG CGTTCTGGAG CCAGAACCGA
GCCCGAAATC AGCCTGACGG CAATCTCCAG GCCCCACGCG TGGAGCTGGC GCGGTGTTCA
GACGGAAAGA TCTTTGCCGA TAAGGTAAAG GATAAACTGG AGATGATCGC CACGTTGACC
GGGCTGGACT ACGGGCGCTT CACCCGTTCG ATGTTGTTAT CACAGGGGCA GTTCGCCGCC
TTTCTTAACG CCAAAGCGAA AGAGCGCGCA GAGCTTCTGG AGGAGCTCAC CGGCACTGAG
ATTTACGGGC AGATCTCCGC ACAGGTATTT GAAAAACATA AATCAGCCCG TCTCGAACTG
GAAAAGTTAC AAGCGCAGGC CAGCGGCGTC GCCCTATTGG CGGACGAACA GTTACAGCAA
CTGGAAGCTA GTTTGCAGGC GCTTACTGAC GAAGAGAAAC GCCTGCTGGC CGACCAGCAG
GTACAGCAGC AGCACCTTCA CTGGCTGACC CGAAAAAACG AGCTCCACAC TGAATTACAC
GCCCGGCAGC AGGCGCTGTA CGCGGCGCAA GAGGCGCGAG AAAAAGCGCA GCCGCAGCTC
GCGGCGCTGA CTCTGGCGCA ACCTGCTCGC CAGTTGCGTC CGCATTGGGA GCGCATTCAG
GAACAAACCC GCGCCGTTGA GCGTGTTCGC CAGCACAGTG ATGAAGTGAA TGCTCGCTTA
CAAAGCGCGT ATCGCCTGCG CCAGCGTATC CGCGCCTGCG CGCATCGACA ATTCACACAA
CTGAACGCCA CAGGGCAGCG GTTGAAGACA TGGCTGGCGG AACACGACAG CATCCGCGTC
TGGCGCAGCG AACTGGCGGG GTGGCGAGCA TTATTAACAC AACAATCCCA CGACCGGGCG
CAACTGAGCC AATGGCAACA GCAGTTGCTG AGCGATACGC GTCAGCGTGA TGCGCTACCG
CCGCTCACGC TCGACCTCAC GCCACAGGCG CTGGCGGAAG CCAGGGCATT GCATACCCGA
CAGCGTCCGC TACGCCATCG TCTCGCCGCG CTTCAGGGGC AAATTCTCCC GAAACAAAAG
CGTCAGGCGC AGCTACAGGC AGCTATCGCG CGTCATCATC AGGAGCAGGC GCAATACACC
CAACGTCTGG CGGATAAGCG CCTGAGTTAT AAGACTAAAG CGCAGGAGCT TGCGGACGTT
CGCACTATTT GCGAGCAGGA GGCGCGCATC AAAGATCTGG AAAGCCAGCG GGCGCACTTA
CAGTCCGGCC AGCCGTGTCC GCTTTGCGGC TCGACGACGC ACCCCGCCAT CGCCGCCTAT
CAGGCGCTGG AACTGAGCGC GAATCAAACC CGCCGCGACG CGCTGGAAAA AGAGGTCAAA
ACGCTGGCGG AAGAAGGCGC GGCGCTGCGA GGACAGTTAG ATGCCTTAAC GCAACAATTA
CAGCGGGATG AAAGCGAGGC GCAGTCGTTG TTGCAGGAGG AGCAAGCGCT TACTGAGGAA
TGGCAAACGC TGTGCGCTAC GCTGGGCGTT CAGCTCCAGC CGCAAGAAGA CCTAGCGGGC
TGGCTGACCG CCGCGGAAGA GCATGAGCAA CAGTTGGATC AGCTCAGCCA GCGTCATGCT
CTACAAACGC AAATCGCGGC GCATACTGAA CAGGTAGCGC GCTTTACCGC GCAGATTGCG
CAGCGTCAGG CGTCGCTGAC GGCTGATTTG GCGCAGTATA CGCTTTCCCT TCCTGCGCCA
GAAGACGAGG CTTCGTGGCT GAATGAGCGC GCCGACGAAG CGAAAATATG GCAACAGCGT
CAGACAGAGT TCGCGGATTT GCAAACGCAG ATCGACAGGC TTGCCCCGTT GCTGGAGACG
CTACCGCAAA CGGATACCGC GGATTCCGAC GACGACGTGC CGCTGGATAA CTGGCGGCAG
GCGCATGATG AGTGCGTGTC ATTACAAAGC CAGTTGCAAA CCCTGCAGGA ACAAACGACG
CAGGAGCAGC AGCGCGCCGC CGAGGCGATA GCGCACTTTG ATGCGGCGTT AAAAAATAGC
CCGTTTGACA GCCAGGCAAC GTTCCTGGCG GCGTTGCTGG ATGAAGAGAC CGTGACCCGT
CTGGAAAAAC AACAACAAAC GCTGGAAAGT CAGCTACAAC AAGCGAAGGC GTTAAGCGCG
CAGTCCGCGC AGGCGCTGGC TGACCATCAG CAACAGCCGC CCGCCGGTCT GGACCCAACG
TGTACGGCGG AGCAGCTCGC GCAGCGGCTG ACGCAGTTGG CGCAACAACT GCGCGAAAAC
ACGACACGCC AGGGGGAAAT CCGCCAGCAA ATTAAACAGG ATGCAGATAA TCGGCAGCGC
CAACGCGCGC TGATGGCGGA AATGAAGCAA GCCTCTCAGC AAGTGGAAGA CTGGGGCTAT
CTCAATGCGC TGATCGGCTC TAAAGAAGGT GATAAGTTCC GCAAATTCGC CCAGGGACTG
ACGCTGGATA ATCTGGTCTG GCTGGCGAAT CATCAGCTCA CCCGCCTGCA TGGCCGTTAT
TTATTGCAGC GCAAAGCCAG CGACGCGCTG GAACTGGAGG TTGTCGATAC CTGGCAGGCC
GACGCCGTGC GCGATACGCG AACGTTATCA GGCGGCGAAA GTTTCCTGGT CAGCCTGGCG
CTGGCGCTGG CGTTATCAGA TTTGGTCAGC CATAAAACGC GCATTGATTC TTTGTTCCTG
GACGAAGGCT TCGGCACGCT TGATAGCGAA ACGCTGGACG CCGCGCTGGA TGCGCTCGAC
GCGCTGAATG CCAGCGGGAA GACCATCGGT GTGATTAGCC ACGTGGAAGC CATGAAAGAA
CGTATCCCTG TGCAGATAAA AGTGAAAAAA ATCAATGGGC TTGGTTATAG CAAACTGGAC
AAAACGTTTG CCGTGGAGTA A
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| Protein sequence | MKILSLRLKN LNSLKGEWKV DFTAEPFASN GLFAITGPTG AGKTTLLDAI CLALYHETPR
LNTVSQSQND LMTRDTAECL AEVEFEVKGE AWRAFWSQNR ARNQPDGNLQ APRVELARCS
DGKIFADKVK DKLEMIATLT GLDYGRFTRS MLLSQGQFAA FLNAKAKERA ELLEELTGTE
IYGQISAQVF EKHKSARLEL EKLQAQASGV ALLADEQLQQ LEASLQALTD EEKRLLADQQ
VQQQHLHWLT RKNELHTELH ARQQALYAAQ EAREKAQPQL AALTLAQPAR QLRPHWERIQ
EQTRAVERVR QHSDEVNARL QSAYRLRQRI RACAHRQFTQ LNATGQRLKT WLAEHDSIRV
WRSELAGWRA LLTQQSHDRA QLSQWQQQLL SDTRQRDALP PLTLDLTPQA LAEARALHTR
QRPLRHRLAA LQGQILPKQK RQAQLQAAIA RHHQEQAQYT QRLADKRLSY KTKAQELADV
RTICEQEARI KDLESQRAHL QSGQPCPLCG STTHPAIAAY QALELSANQT RRDALEKEVK
TLAEEGAALR GQLDALTQQL QRDESEAQSL LQEEQALTEE WQTLCATLGV QLQPQEDLAG
WLTAAEEHEQ QLDQLSQRHA LQTQIAAHTE QVARFTAQIA QRQASLTADL AQYTLSLPAP
EDEASWLNER ADEAKIWQQR QTEFADLQTQ IDRLAPLLET LPQTDTADSD DDVPLDNWRQ
AHDECVSLQS QLQTLQEQTT QEQQRAAEAI AHFDAALKNS PFDSQATFLA ALLDEETVTR
LEKQQQTLES QLQQAKALSA QSAQALADHQ QQPPAGLDPT CTAEQLAQRL TQLAQQLREN
TTRQGEIRQQ IKQDADNRQR QRALMAEMKQ ASQQVEDWGY LNALIGSKEG DKFRKFAQGL
TLDNLVWLAN HQLTRLHGRY LLQRKASDAL ELEVVDTWQA DAVRDTRTLS GGESFLVSLA
LALALSDLVS HKTRIDSLFL DEGFGTLDSE TLDAALDALD ALNASGKTIG VISHVEAMKE
RIPVQIKVKK INGLGYSKLD KTFAVE
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