Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0417 |
Symbol | |
ID | 6484013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 433262 |
End bp | 434419 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642735840 |
Product | beta-lactam binding protein AmpH |
Protein accession | YP_002039614 |
Protein GI | 194443461 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 0.144637 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAACGTA GTCTGCTTTT TACTGCCATG CTGTTTGCGG CATCACTTAC TTCTGTCCAG GCGGCTCAGC CGATTGCCGA TCCGGTTTTT GCCTCTGATA TCGTTGATCG TTATGCCGAG CATATCTTTT ATGGTAGCGG CGCCACAGGC ATGGCGCTGG TGGTGATCGA CGGCAATCAA CGCGTGTTTC GTAGTTTCGG TGACACCAGA CCGGGCAATA ATGTTCGTCC ACAGCTTGAT TCGGTCATTC GTATCGCTTC TATCACCAAG CTCATGACCA GTGAAATGTT GGTAAAATTG CTCGATCAGG GAACGGTAAA ATTAAACGAT CCTCTCAGCA AATATGCGCC TCCCGGCGCG CATGTCCCGA CGTATCAAGG CACGCCGATT ACGTTGGTCA ACTTAGCGAC CCATACCAGT GCGCTTCCGC GAGAACAGCC CGGCGGCGCG GCGCATCGTC CGGTATTTGT CTGGCCAACC CGCGAACAAC GCTGGAGCTG GCTCTCCACA GCAACGTTAA AAGTCGCGCC CGGTTCACAG GCGGCCTATT CCAATCTGGC GTTCGACCTG TTAGCCGACG CGCTGGCGAC CGCCTCCGGC AAACCTTATA CGCAACTGTT TGAAGAAAAG ATTACCCGCC CGCTGGGAAT GAAAGACACC ACGTTTACCC CCTCTCCCGA TCAGTGTAAA CGTCTGATGG TGGCAGAAAA AGGCGCAAGC CCCTGTAATA ATACGCTGGC TGCCATTGGC AGCGGCGGGG TCTATTCTAC GCCAGGAGAT ATGATGCGCT GGATGCAACA GTATCTGTCT TCAGATTTTT ATCACCGTAG CCATCAGGCC GATCGTATGC AAACGTTGAT TTATCAGCGC ACACAGTTAA AGAAAATCAT CGGGATGGAC GTACCGGGTA AAGCCGACGC GCTCGGTCTG GGCTGGGTCT ATATGGCGCC AAAAGACGGA CGTCCTGGCA TTATCCAGAA AACAGGAGGC GGTGGCGGTT TTATTACCTA TATGGCGATG ATCCCGCAAT ATAATATTGG CGCTTTTGTG GTCGTAACCC GTTCCCCCCT CACTCGTTTT ACCAATATGA GCGACGGGAT TAACGATTTG GTTACTGAGC TAAGCGGCAA TAAACCGATT GCTATTCCTG CATCCTGA
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Protein sequence | MKRSLLFTAM LFAASLTSVQ AAQPIADPVF ASDIVDRYAE HIFYGSGATG MALVVIDGNQ RVFRSFGDTR PGNNVRPQLD SVIRIASITK LMTSEMLVKL LDQGTVKLND PLSKYAPPGA HVPTYQGTPI TLVNLATHTS ALPREQPGGA AHRPVFVWPT REQRWSWLST ATLKVAPGSQ AAYSNLAFDL LADALATASG KPYTQLFEEK ITRPLGMKDT TFTPSPDQCK RLMVAEKGAS PCNNTLAAIG SGGVYSTPGD MMRWMQQYLS SDFYHRSHQA DRMQTLIYQR TQLKKIIGMD VPGKADALGL GWVYMAPKDG RPGIIQKTGG GGGFITYMAM IPQYNIGAFV VVTRSPLTRF TNMSDGINDL VTELSGNKPI AIPAS
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