Gene SNSL254_A0404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0404 
Symbol 
ID6485481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp417140 
End bp419230 
Gene Length2091 bp 
Protein Length696 aa 
Translation table11 
GC content53% 
IMG OID642735828 
Productferrichrome-iron receptor 
Protein accessionYP_002039602 
Protein GI194444217 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0000000000262521 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTGCGA CAACGCGTAT GGCGCTATTG ATAGGCGGAG CTATCGGCGG CGCGACTTTT 
CCTCTTTTTG CCCAGGAAAC CACAAAAAAT GATACCGTCA TTGTCACCTC GCCCGTTCAG
AGTGGCGCGA CCAAGCTGGC GACGCCAGAT ATTGAAACGC CGCAGTCGGT ATCCATTATT
ACCCGCCAGC AGTTTGAAGA GCAGGGCGCA ACCAGCGTGC GTCAGGCGGT CAGCTACACC
CCAGGCGTAT ACAGTAACCA GATAGGCGCC TCTAACCGCT TTGATTACAT CGTATTGCGT
GGTTTTTCGG ACGGTAGTCT GGATAACGTC TATCTCGACG GGTTAAAAAT GATGGGCGAC
ACCAATTCGC ACAGTTCGTT GGTGGTTGAC CCCTGGTTTC TGGAAGATAT CGAGGTGGTA
CGCGGCCCGG CGTCCGTTCT GTATGGACGT TCATCGCCAG GCGGCATTGT CGCGCTGACG
TCGCGAAAAC CGGCGTTTGA TGCCGGAGGA GAAGTGAAGC TGTTTGCCGG CAATAACAAC
CAGCGCGGGG CGGCTTTTGA TGTGACCGGC CCACTGGATG ACAATGAACG TGTGGCGGCG
CGTCTTAGCG GCATGACACG TTACGCCGAT TCGCAGTTTA CCCCCTTGAA AGAGGAACGT
TATGCGCTGA TGCCGAGCCT GACCTGGCGA ATTACCGATC GGACGCGTCT TGATCTTATG
GCCTATCTGC ACCGTGATCC GGAAGGCGGT AGCCACTCCG GACTGCCTTA TCAAGGCACG
GTTGTACCTT ATAACGGCGG AAAAATTTCT AACACTTTCT TTGAAGGTGA AGATGACTAC
GACAAATACG ATCGCCGTGA AAATATGGTG GGTTATAACA TTGAGCATCT GTTCGATAAC
GGCTGGTCGG TACGGCAAAA ATTGCGCTAT TTGCATACCA AAGTGACGTT GAATCAGGTC
TATGCCGCAG GTTGGTTGAA TGAAACGGCG CTGAATCGCG GCTATTCCGG CTCCGGGGAG
AAAATGTCGG CTATCGCGCT GGATAATCAG CTCGACGGCA GCGTGGATAC CGGGGCGATT
AATCATCGTC TGCTGGTGGG GATCGATTAT CAGGATCGCA GTAACCATAC TACTGGCTAT
TATGGCGCGT TTCCGCCGAT TGACGCTTTC AACCCTGTTT ATGGCGCTCA GCCGGATTAC
ATTACGTTGT ATAGCCGTGA AAAACATAAG CTGCGGCAGA CCGGATACTA TTTACAGGAT
CAGATGTCAT GGGATCGCTG GCGCTTTACG TTGGGCGGTC GTTACGATCG GGTCAGCGTG
TCTAACATCG ACAAACTTCA TGATTCACGC AGCGATCTCG ATAAAAACAA CGTCAGTACC
CGTGCTGCGT TGCTTTATCT GTTCGACAAT GGCGTCGCCC CCTATCTCAG TTATTCTACC
GCGTTTACGC CGACCAGCTT CGCCGACGAA AACGGCAATG TGCTGGAACC GATGAAAGGC
AAGCAGTGGG AGGCGGGGGT AAAATACGAA CCGCCGGGGG GGAATAGCCA GTTTAGCGCC
GCCGTGTATC GTATTAATCA GACCAATATC GCGACCAAAG AAGAACCTAC CGATCCGTAC
CGCTCGATTG GTGAAATTGA GTCTAAAGGG GTTGAACTGG AGGCCATTAG CCATTTGTCG
GATAGCGTCC GTTTGCAGGC GGCGTATACC TATACTGATA TCCGTTATAA GAAAAGTAGC
CCGCAAGAAC AGGGTAAGCG CGCGGTTTAT GCTCCACGGA ACCAGGCCAG CGCCTGGCTA
AGCTACGATG TGAAAAGCGG TCTGTTAGAG GGGCTGACTT TGGGCTCCGG TATCCGGTAC
GTCAACGGCG TGACCAGCGA TCGCCTGAAT ACCCACACGT TGCCGTCTTA TACACTGGTC
GACATGGTGG TTGGGTATGA TTTATCCAGC ATTGGGTTAA ATGGCTTGAG CGCCCAGCTC
AACGTAAATA ACCTGACGGA CAAACGCTAT GTCGCTGCCT GTAATTCGCT CTCTTATTGT
TATTTTGGCG CCGAGCGTAG CATTGTAGGC AGCGTGTCAT GGGCGTTTTG A
 
Protein sequence
MFATTRMALL IGGAIGGATF PLFAQETTKN DTVIVTSPVQ SGATKLATPD IETPQSVSII 
TRQQFEEQGA TSVRQAVSYT PGVYSNQIGA SNRFDYIVLR GFSDGSLDNV YLDGLKMMGD
TNSHSSLVVD PWFLEDIEVV RGPASVLYGR SSPGGIVALT SRKPAFDAGG EVKLFAGNNN
QRGAAFDVTG PLDDNERVAA RLSGMTRYAD SQFTPLKEER YALMPSLTWR ITDRTRLDLM
AYLHRDPEGG SHSGLPYQGT VVPYNGGKIS NTFFEGEDDY DKYDRRENMV GYNIEHLFDN
GWSVRQKLRY LHTKVTLNQV YAAGWLNETA LNRGYSGSGE KMSAIALDNQ LDGSVDTGAI
NHRLLVGIDY QDRSNHTTGY YGAFPPIDAF NPVYGAQPDY ITLYSREKHK LRQTGYYLQD
QMSWDRWRFT LGGRYDRVSV SNIDKLHDSR SDLDKNNVST RAALLYLFDN GVAPYLSYST
AFTPTSFADE NGNVLEPMKG KQWEAGVKYE PPGGNSQFSA AVYRINQTNI ATKEEPTDPY
RSIGEIESKG VELEAISHLS DSVRLQAAYT YTDIRYKKSS PQEQGKRAVY APRNQASAWL
SYDVKSGLLE GLTLGSGIRY VNGVTSDRLN THTLPSYTLV DMVVGYDLSS IGLNGLSAQL
NVNNLTDKRY VAACNSLSYC YFGAERSIVG SVSWAF