| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0391 |
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| Symbol | |
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| ID | 6486479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 401517 |
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| End bp | 402743 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642735815 |
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| Product | putative auxiliary transport protein membrane fusion protein (MFP) family |
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| Protein accession | YP_002039589 |
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| Protein GI | 194443154 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0000000000301381 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTAGAA CATTCAAAAT TATGTTGATA GCCGGCGTCA TCGCCGCCAT CGGGGGCGTG
ATTTACATGG CCGGCGAAGC ACTATGGGAT AAAGACAACG CCGTCGGCCC CCCGGCCAGC
GCGCCGCCTC CACCGTCGGT ACCGGTTGCT AAAGCCCTTA GCCGTACACT CGCGCCTACG
GCGGAATTCA CCGGTTTTCT GGCCGCGCCG GAGACCGTGG AGCTGCGTTC GCGCGTGGGA
GGAACCCTTG ACGCCGTCAG CGTTCCGGAA GGACGTCTGG TAAGCCGCGG ACAACTGCTG
TTCCAGATCG ATCCGCGCCC GTTCGAGGTC GCCCTCGACA CCGCCGTCGC GCAATTACGT
CAGGCTGAAG TACTGGCCCG CCAGGCGCAG GCGGATTTCG ATCGCATTCA ACGACTGGTC
GCCAGCGGCG CCGTATCACG TAAAAACGCT GACGATGTCA CCGCCACGCG TAATGCGCGA
CAGGCGCAGA TGCAATCGGC CAAAGCCGCC GTCGCCGCAG CGCGCCTTGA ACTCTCCTGG
ACCCGTATTA CCGCGCCCAT TGCCGGACGC GTTGACCGCA TACTGGTGAC CCGGGGCAAT
CTGGTCAGCG GCGGCGTAGC GGGTAACGCC ACGCTTCTGA CGACTATCGT GTCTCACAAT
CCCATGTATG TGTATTTCGA TATTGACGAA GCCACCTGGC TGAAGGCGTT ACGGCATACC
CGCTCCGACA AGAATCCACC GGTAGTCAAC ATGGGGTTAA CCACCGATAA CGGGCTGCCT
TATCAGGGCG TACTCGACTT TATGGGCAAT CAGATGAACC GCAGCACCGG CACTATCCGG
GCACGCGCCG TGATTCCTGA CCCCGACGGA ATGCTTTCTC CCGGCCTGTT TGCCCGAATC
AGTTTGCCCA TCGGCGAGCC GCGGGAAACC GTGCTAATTG ACGATCTGGC GGTGAGCGCC
GATCAGGGCA AAAACTATGT GCTGATCGTC GGCAAGGAGA ATCAGGTGGA GTATCGTCCG
GTTGAGCTGG GACAAATGGT CGATGGATTC CGCGTCGTTA CACAGGGAGT ACAGCCGGGA
GAAAAAATCA TCCTCAAGGG GCTGGTGCGT CCTGGCATGA CCGTTGCGCC GCGTCTGGTG
CCGATGCGGC AGAATATGCC CGAGAAACAG ACCGCGACAT TGACTAAAGC GGACGGCGAC
AGCGAGTCGA AGGCGGTGCG CCAATGA
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| Protein sequence | MRRTFKIMLI AGVIAAIGGV IYMAGEALWD KDNAVGPPAS APPPPSVPVA KALSRTLAPT
AEFTGFLAAP ETVELRSRVG GTLDAVSVPE GRLVSRGQLL FQIDPRPFEV ALDTAVAQLR
QAEVLARQAQ ADFDRIQRLV ASGAVSRKNA DDVTATRNAR QAQMQSAKAA VAAARLELSW
TRITAPIAGR VDRILVTRGN LVSGGVAGNA TLLTTIVSHN PMYVYFDIDE ATWLKALRHT
RSDKNPPVVN MGLTTDNGLP YQGVLDFMGN QMNRSTGTIR ARAVIPDPDG MLSPGLFARI
SLPIGEPRET VLIDDLAVSA DQGKNYVLIV GKENQVEYRP VELGQMVDGF RVVTQGVQPG
EKIILKGLVR PGMTVAPRLV PMRQNMPEKQ TATLTKADGD SESKAVRQ
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