| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0389 |
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| Symbol | |
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| ID | 6483605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 396879 |
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| End bp | 398336 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642735813 |
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| Product | outer membrane protein OprM |
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| Protein accession | YP_002039587 |
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| Protein GI | 194444433 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.303382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.0000297498 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGATCA CTTTTACAGG CTATCGGCAG ACCGCCACGC TGGCGACGCT TGCTTTCGTC
ACCACGCTTG CTGGCTGTAC GATGGCGCCG AAGCACGAAC GCCCCGCATC GCCGACTGCG
ATGGTCTATC CCTACGCAAC GTCAACCGTT TCTGGCGCGC CGGATGCCGC TGACATTGGC
TGGCGTGATT TCTTCCACGA TCCGCTTCTA CAGGAACTGA TTGCGATCGC GTTACGCAAT
AATCGGGATT TACGCAAGGC AGGGCTCAAT GTTGAAGCCG CCCGGGCGTT ATACCGCATT
CAGCGCGCGG AGATGCTGCC GACGCTCGGC ATCGCCACCG CCATGGACGC CAGTCGCACT
CCCGCCGATC TCAGCGTCAT GGACGAGTCT GAGATTAACC GACGCTACGA GGCGGCTGGG
GCGACGACGG CCTGGGAACT GGATCTCTGG GGGCGAGTGC GAAGCCTTAG CGACCAGGCA
TTAGCCGCCT ATATGGCGCT TGATGAGACG TACATTGCGG CGCGAATGAG CCTGGTTTCC
GAAGTCGCCA GCGCCTGGCT GACGCTACGG GCTGACCGGG AGCTGCTGCG CTTAACCGAG
GATACGCTGG CCGCGCAAAA AAGTTCATAC ACATTGACGA CCCAGCTTGC CCGGACAGGT
AACGCCACAC AGCTCGATCT GCGTATGGCG GAGATCGCGC TGCGTTCTGC CGAAATCAAT
CGCGCGGCGT ATACGCGACA GTTGGCGCGG GATCGTAACG CGCTGGAATT GCTGTTGGGC
CAGCCGCTCA CGCCTGAACT GTCGCGTCGA CTAAACGAGG CGGTCACGCT TACGGAAGTC
GCGATCCCGA CCACATTGCC AGGCGGATTA CCGTCAGTTC TGCTGGTACG CCGCCCGGAT
ATTCGCGCCG CCGAGTACAG GCTGCGTGGC GCAAACGCCC GAATAGGCGC AGCGCGCGCC
GCCTTCTTCC CGACCATCAG CCTGACAGGC ACGGCGGGAA CGGCCAGCGC GTCTCTTAGC
GGACTCTTTG AACCGGGATC GGGAAGCTGG CGTTTTCTAC CGCAAATCAC CTTGCCTCTC
TTTCACGGCG GCGCATTACG CGCTGACCTG GATAGGGCGC ATGTCCAAAA ACAGATTGAA
ATCGCCAGGT ATGAAAACGT TATTCAGCAA GCCTTTCGCG ACGTGGCGGA TGGTCTGGCG
GGACAGCGTA CGCTGAATGA CCAGGTGCAA TCAGAACAAC GCGCGGTTGA AGCCAGTCAA
ATCGCCTATG AGCTGGCCGG ACTCCGTTTT CAGGAAGGCG TCGATGACTA CCTTACGCTG
CTTGATACCC ATCGTATGCT TTATGGCGCA CAACAGCGCC TGGTACGCAC ACGTCTCATG
CAACAGTTAA ATATCATTAA CCTGTATAAA GCATTAGGCG GCGGTTGGCG GGAATACAGT
GAGAAAAAGC AAGGTTAG
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| Protein sequence | MKITFTGYRQ TATLATLAFV TTLAGCTMAP KHERPASPTA MVYPYATSTV SGAPDAADIG
WRDFFHDPLL QELIAIALRN NRDLRKAGLN VEAARALYRI QRAEMLPTLG IATAMDASRT
PADLSVMDES EINRRYEAAG ATTAWELDLW GRVRSLSDQA LAAYMALDET YIAARMSLVS
EVASAWLTLR ADRELLRLTE DTLAAQKSSY TLTTQLARTG NATQLDLRMA EIALRSAEIN
RAAYTRQLAR DRNALELLLG QPLTPELSRR LNEAVTLTEV AIPTTLPGGL PSVLLVRRPD
IRAAEYRLRG ANARIGAARA AFFPTISLTG TAGTASASLS GLFEPGSGSW RFLPQITLPL
FHGGALRADL DRAHVQKQIE IARYENVIQQ AFRDVADGLA GQRTLNDQVQ SEQRAVEASQ
IAYELAGLRF QEGVDDYLTL LDTHRMLYGA QQRLVRTRLM QQLNIINLYK ALGGGWREYS
EKKQG
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