Gene SNSL254_A0383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0383 
Symbol 
ID6484690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp391594 
End bp393144 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content49% 
IMG OID642735807 
Producthypothetical protein 
Protein accessionYP_002039581 
Protein GI194445311 
COG category[T] Signal transduction mechanisms 
COG ID[COG4943] Predicted signal transduction protein containing sensor and EAL domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0298247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.0200463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTTTA TTGCCGTTCC ACTGATCGTA ATGATATTGG TGGGGTTACT CGCGGGTATC 
TTCCAGCTAA AACGAGATAT CGCCGTCAGC GCCAATACGC TGCTGCGGTT TAGCGCGGAT
ATATCCGCCG CCTCCTGGCA AGTCGCCGGA AAAGCCGCCA GACTGGCTGA GAGTTCCTGC
ACTGATACGC TGAAAGAACT GTCCAGAACG CGGGCCTTCA CTCCTTATGT ACGTGACATT
GGGTTTCTGG AAAATGGTGA TATCACTTGC TCCTTTGTCA CAGGAACCGA ACGCTATCAT
TTTTCCCGGC TGGCAGGGCT TTCCTTACCT GCTTCTTATC CGGAACGGTG GTTGCGATCT
ATCGGTAGTA TGGCCGAAGG ACCCGATCGC CTTGTTGTGG TTTATGTGAA AAAAGTAGCA
GCGAATAAAG CGGCCTTCGT CATTGTGGAT TCGCAGTATG TCCAGGAGCT CATAGAGATA
TTGGCAGCAG AGAGAGCATC AGCCTTTAGC CTGACATTCG GCGCAGGGGA GGCGATTACC
AGCGCTGCGA CGTTGCGCGG TAAGGCGTTT TTAACGCAGC GGTTCACCTC AACCGATCAC
ACTCTCCAGC TGATGGTGCG AACCCCCTTC TCAACGTTAT CGGCATACTG GTTACAAAAC
CTTTTTATTT TTGTTCCGCT GTCATTGTGT CTTTCTGTAG GGATGATGTT GTTCTACAGG
CGCTGGTATT TAAAACGTTT ATCTCTGGCC CGGGAGATTG CCAGGGGAAT AACGCACAAT
GAGTTTACGG TACATTATCA GCCTGTTTTT AATGTTAAAC ACGGTAGTTG CGGCGGCGTG
GAGGCGCTAA TGCGCTGGCC GCAACCGGAT GGCCGTTTTA TAACCCCGGA TATTTTTATT
ACCGCCGCAG AAAATGAAGG CATGATTATT CCACTCTCTC GTCATCTGTT CGAACTGATT
GCTCATGACG TGATAAACTG GACTGTACCG GATGATTTCT ATATCAGCGT AAATATATCG
CCTGCGCATC TTATGGATGA CGGTTTTATA CAAGATATAG AGGCGCTCAG GACTCGTTTG
GGAACGATAA CGCTTATGTT GGAGCTCACC GAACGTAGCC TGATTGTAGA ACCTTCACAG
GTCGCGGAAA AACTTTCAAC GCTCCGTGAA AAAGGCGTGT TAATAGCGAT TGATGATTTT
GGGACCGGCT ATTGCTCCCT CTCCTATCTC CAACAATTAC CTGTAGACTA TCTTAAAATA
GACAGAACGT TTATCGATAC CATTGATACC AGCAGCGATG ATGTTCCTGT CCTGGATACT
ATCATTACGC TGAGTCAGCG ACTGGGACTC AATGTGGTTG CCGAAGGGGT CAGTACCCAG
CACCAATTGC GTTATATCTT AAGCCACGGG GTAGGATTCG TTCAGGGATT TCTTTATGCC
AGGCCGATGG AGGCTAATGA CTTTATGAGC TGGCTTGGCA AGTCGGCCCA GAGGCAAAAT
GGTCTGCTCA AGGGGGAAAA CGAATCTGCG AGTGGCCTGG TGGCTGAATA A
 
Protein sequence
MLFIAVPLIV MILVGLLAGI FQLKRDIAVS ANTLLRFSAD ISAASWQVAG KAARLAESSC 
TDTLKELSRT RAFTPYVRDI GFLENGDITC SFVTGTERYH FSRLAGLSLP ASYPERWLRS
IGSMAEGPDR LVVVYVKKVA ANKAAFVIVD SQYVQELIEI LAAERASAFS LTFGAGEAIT
SAATLRGKAF LTQRFTSTDH TLQLMVRTPF STLSAYWLQN LFIFVPLSLC LSVGMMLFYR
RWYLKRLSLA REIARGITHN EFTVHYQPVF NVKHGSCGGV EALMRWPQPD GRFITPDIFI
TAAENEGMII PLSRHLFELI AHDVINWTVP DDFYISVNIS PAHLMDDGFI QDIEALRTRL
GTITLMLELT ERSLIVEPSQ VAEKLSTLRE KGVLIAIDDF GTGYCSLSYL QQLPVDYLKI
DRTFIDTIDT SSDDVPVLDT IITLSQRLGL NVVAEGVSTQ HQLRYILSHG VGFVQGFLYA
RPMEANDFMS WLGKSAQRQN GLLKGENESA SGLVAE