| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0380 |
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| Symbol | |
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| ID | 6486356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 388040 |
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| End bp | 388969 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642735804 |
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| Product | fimbrial chaperone protein |
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| Protein accession | YP_002039578 |
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| Protein GI | 194445521 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.0692869 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCTGA AGCGAGCGCG ACTTATACCG CGCGGTATTA CTCTACCGGG AAAGCAGAGG
CTGGGACAGT CGCTGCCACC CTTCAATACG CCGTTTCGTA TAAATAATTG TCGCTACGGT
CTGGCGTTGA AACGCCAGAC CATTTTCAAT CGCCAGGGAG TTGTTGAGAT GAAAATGGAT
ACCCGACATT CCGCATTATA TTACTTAATA GTTTTTCTAT TCCTGGCCCT ACCCGCCACA
GCATCGTGGG CGAGCGTTAC TATTTTGGGT AGCCGAATAA TTTACCCATC AACAGCCTCC
TCCGTAGATG TGCAGTTAAA AAATAATGAT GCAATACCTT ATATCGTACA AACCTGGTTT
GACGATGGCG ATATGAATAC CAGCCCGGAA AATAGCAGCG CGATGCCGTT CATTGCCACG
CCGCCGGTAT TTCGTATTCA ACCCAAAGCA GGCCAGGTGG TACGCGTAAT TTATAACAAC
ACGAAAAAAT TGCCGCAGGA TCGTGAGTCA GTATTCTGGT TTAACGTATT ACAGGTACCA
CCAACGAATA TTGGCAGCGA CAGCGGGCAA AATAAAATGT TGGTGATGCT GCGCTCAAGA
ATAAAACTTT TCTATCGTCC TGACGGGCTA GGTAAACCTG ATAGTCTGGC GAAAAAATTA
CAGATTAAAA CGGTAAATAA GGGTTCCGGA AAAAGCGGTA TTGTTATTGT TAATCCGCAG
CCCTGGTTTG CCTCTTTAAG TAATTTGAAT GTAAAAGTGA ACGGCGCTTC ATATAACCTG
GATGCAGACA TGATTGCCCC TTTCTCCAGT CAAACCTGGT GGCTGCCGGG CAAACGGTCA
CTCAAATCCT TCTCCGGTAC AGTCACCGTT ACTTTGGTTA ACGACCTGGG CGCAAGGATA
AGCGAGAGCT ACGATGTCCC CCACCATTAA
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| Protein sequence | MLLKRARLIP RGITLPGKQR LGQSLPPFNT PFRINNCRYG LALKRQTIFN RQGVVEMKMD
TRHSALYYLI VFLFLALPAT ASWASVTILG SRIIYPSTAS SVDVQLKNND AIPYIVQTWF
DDGDMNTSPE NSSAMPFIAT PPVFRIQPKA GQVVRVIYNN TKKLPQDRES VFWFNVLQVP
PTNIGSDSGQ NKMLVMLRSR IKLFYRPDGL GKPDSLAKKL QIKTVNKGSG KSGIVIVNPQ
PWFASLSNLN VKVNGASYNL DADMIAPFSS QTWWLPGKRS LKSFSGTVTV TLVNDLGARI
SESYDVPHH
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