Gene SNSL254_A0353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0353 
Symbol 
ID6482790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp363527 
End bp364666 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content57% 
IMG OID642735781 
Producthypothetical protein 
Protein accessionYP_002039556 
Protein GI194443257 
COG category[S] Function unknown 
COG ID[COG1690] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03073] release factor H-coupled RctB family protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAATT ATATTCGTCC TTTATCAGAT GTGGTATTTT CTATCGCATC AGATAACCTG 
TGGATCGAAG ATTCCGCGAT CCAACAATTA TATACGACGG CTAAGTTAAC CGGTATGAAA
CGCGTTATCG GGATGCCAGA TCTGCATCCG GGGCGCGGCT ACCCTATTGG CGCAGCCTTT
TTCTCGCGTG GACGCTTTTA TCCGGCGCTG GTCGGCAACG ATATCGGTTG CGGCATGGCG
TTATGGCAAA CGGATATTTT AGGGCGTAAA TATAATGCCG ATAAACTGGA GAAGCGGCTG
GCGTCGCTGC CTGACGTGGC GGACGCGCAG TGGCTGGAGG AGAATGTCCC CGCCGCAATG
CAGCATCATT CGTGGCGCTC TGCGCTGGGT TCCATTGGCG GCGGCAATCA TTTTGCCGAG
CTGCAGCAGG TCGATCGCAT CGTCGATGCT GATTCGTTCG CTTTGTCGGG GTTGCAAAAA
GCGCAGTTAT TACTGCTGGT ACACAGTGGT TCACGCGGTC TGGGGCAAGC TATCCTGCGT
CGTCATGTGG AGGCGTTTTC GCATAACGGT TTGCCGGAAG ATAGCGACGA TGCGCGCCGC
TATCTTGCAG AACATGACGA TGCGCTGGCA TTTGCCCGCA GTAATCGCGC GCTGATTGCC
CGCCGGATAC TGCAACAGCT CAGGGCTGAG GGCGAACCGC GGCTGGATGT GGCGCATAAC
TTCGTTGAAC CCTGTACTGT CGCGGGTGAG GCGGGGTGGC TGCACCGTAA AGGCGCTACG
CCAGATGGGC AGGGACTGGT GATTATCCCC GGCTCGCGCG GCGATTATAG CTGGCTGGTG
AAACCCGTCG TCAGCGAGGA GAGCCTCTTC TCCCTGGCGC ACGGCGCGGG GCGCAAATGG
ATGCGTACCG AGTGTAAAGA CCGGTTATCG GCAAAATTTA CCCCGCGACA GCTCTGCCGT
ACCGGGATGG GTAGCCGGGT GATTTGCCGC GATCGCCAGC TCATTTATGA AGAAGCGCCG
CAGGCGTATA AATCCATCGA TAGCGTTGTG GATTGTCTGG CAGACGCCGG ACTGATTACG
CCGGTTGCCT GCCTGCGTCC GGTGCTGACG CTGAAAACCT CAGGGGAGAA AAGCGCATGA
 
Protein sequence
MGNYIRPLSD VVFSIASDNL WIEDSAIQQL YTTAKLTGMK RVIGMPDLHP GRGYPIGAAF 
FSRGRFYPAL VGNDIGCGMA LWQTDILGRK YNADKLEKRL ASLPDVADAQ WLEENVPAAM
QHHSWRSALG SIGGGNHFAE LQQVDRIVDA DSFALSGLQK AQLLLLVHSG SRGLGQAILR
RHVEAFSHNG LPEDSDDARR YLAEHDDALA FARSNRALIA RRILQQLRAE GEPRLDVAHN
FVEPCTVAGE AGWLHRKGAT PDGQGLVIIP GSRGDYSWLV KPVVSEESLF SLAHGAGRKW
MRTECKDRLS AKFTPRQLCR TGMGSRVICR DRQLIYEEAP QAYKSIDSVV DCLADAGLIT
PVACLRPVLT LKTSGEKSA