Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0344 |
Symbol | |
ID | 6485371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 354407 |
End bp | 355126 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642735773 |
Product | putative outer membrane adhesin |
Protein accession | YP_002039548 |
Protein GI | 194444662 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3637] Opacity protein and related surface antigens |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.0902734 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACT TTTTCGCAGT CTGCATCATT CCCCTTGTGG TAACCTGGTC CGCTACTGCA TCAGCAAAAG AAGGGATCTA TATCACCGGG AAAGCGGGGA CATCCGTAGT AAATGTCTAT GGAATCAACT CAACCTTCAG CCAGGATGAG ATAGTCAATG GTCATGCAAC GTTACCTGAC CGTACCAAAG GCGTTTTTGG CGGCGGGGTT GCTATCGGTT ATGACTTTTA TGATCCATTC CAGCTTCCAG TACGTTTAGA ACTGGATACC ACTTTCAGAG GTGAGACGGA TGCTAAAGGC GGGCAGGATA TTATTGCATT TGGTCAGCCA GTACACATAA ATGTAAAAAA TCAGGTCCGA ATGACCACTT ACATGGTTAA TGGTTATTAT GATTTTCACA ATAGTACGGC ATTTACACCC TATATCAGCG CAGGTGTTGG CCTCGCTCAT GTGAAGCTAA GTAATAACAC CATTCCTGTT GGTTTTGGTA TTAATGAAAC TCTGTCTGCT TCAAAAAATA ACTTTGCCTG GGGCGCAGGT ATCGGTGCAA AATATGCTGT AACAGATAAT ATTATGATTG ACGCCAGTTA TAAATACATT AATGCCGGCA AAGTAAGCAT TTCAAAAAAT CACTATGCTG GTGATGAACA TACCGCTTAT GATGCAGACA CAAAGGCTGC CTCCAATGAC TTCATGCTCG GCATTACTTA CGCCTTTTAA
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Protein sequence | MKNFFAVCII PLVVTWSATA SAKEGIYITG KAGTSVVNVY GINSTFSQDE IVNGHATLPD RTKGVFGGGV AIGYDFYDPF QLPVRLELDT TFRGETDAKG GQDIIAFGQP VHINVKNQVR MTTYMVNGYY DFHNSTAFTP YISAGVGLAH VKLSNNTIPV GFGINETLSA SKNNFAWGAG IGAKYAVTDN IMIDASYKYI NAGKVSISKN HYAGDEHTAY DADTKAASND FMLGITYAF
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