| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0338 |
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| Symbol | |
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| ID | 6483193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 348073 |
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| End bp | 350583 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642735767 |
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| Product | outer-membrane fimbrial usher protein |
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| Protein accession | YP_002039542 |
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| Protein GI | 194446016 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.0185038 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCA AACATCCTGC CTTGCTACTG TTTATCGCGG GAGTGGTTCA CTGCGCAAAT
GCGCACACTT ACACATTCGA TGCATCAATG TTGGGCGATG CAGCGAAAGG GGTTGATATG
TCGCTCTTTA ACCAGGGGGT ACAACAGCCA GGGACTTATC GAGTGGACGT AATGGTGGAT
GGTAAACGTG TCGACACCCG TGATGTGGTG TTCAAATTAG AAAAGGATGG GCAAGGAACG
CCTTTTCTGG CTTCTTGTTT GACGGTCAGT CAGCTTTCAC GCTACGGCGT AAAAACGGAA
GATTACCCTC AGTTGTGGAA AGCAGCAAAG ACCCCAGATG AGTGTGCGGA TCTGAGCGCC
ATTCCACAGG CTAAAGCGGT ACTGGATGTC AATAATCAGC AACTGCAACT GAGTATTCCT
CAGGTGGCGT TGCGTACGAA ATTTAAGGGG ATCGCTCCAG AAGATCTTTG GGATGATGGT
ATTCCGGCGT TTCTGATGAA CTACAGTGCG AGGACAACGC AGACGGATTA CAAAATGGAT
ATGGTGGGGC GTGACAACTC TTCCTGGGTA CAACTGCAAC CGGGAATCAA TATAGGTGTG
TGGCGTGTCC GCAATGCGAC CAGCTGGCAG CGGAGTAGTC AACTGTCGGG GAAGTGGCAG
GCAGCATATA CCTATGCTGA GCGTGGACTG TACTCACTAA AAAGTCGTCT GACTCTGGGG
CAAAAGACTT CGCAGGGGGA GATATTTGAT AGTGTGCCAT TTACCGGTGT GATGTTGGCA
TCGGATGACA ACATGGTGCC CTACAGTGAG CGGCAGTTTG CTCCGGTAGT GCGTGGGATT
GCCCGCACGC AGGCTCGGGT GGAGGTCAAA CAGAATGGTT ACACCATTTA CAACACCACC
GTGGCGCCCG GACCGTTTGC ACTGCGGGAT CTGTCGGTAA CAGACAGTAG TGGTGATCTG
CATGTCACCG TGTGGGAGGC CGATGGCAGT ACACAAATGT TTGTGGTGCC GTATCAGACC
CCGGCGATAG CACTGCACCA GGGATATTTG AAGTACAGCC TGTTGGCGGG CCGATACCGA
TCGTCAGACT CTGCAACGGA TAAGGCGCAG ATCGCGCAGG CTACGTTGAT GTATGGTCTG
CCGTGGAACC TCACTGCATA CGGCGGTATA CAGAGTGCAA CGCACTATCA AGCTGCATCG
CTTGGTTTGG GGGGATCTCT CGGGCGGTGG GGGAGTTTAT CTGTCGATGG AAGCGACACA
CACAGTCAGC GTCAGGGGGA GGCGGTACAG CAAGGAGCCT CTTGGCGACT GCGTTACAGC
AACCAGCTGA CTGCGACGGG GACAAATTTT TTTCTGACGA GATGGCAGTA TGCCTCGCAG
GGCTATAACA CCTTATCCGA TGTGCTCGAC AGTTATCGAC ATGATGGCAA CCGTCTATGG
TCGTGGCGAG ATAATTTGCA GCCGAGCTCG CGTACCACCC TGATGTTGAG TCAGTCATGG
GGGAGGCATT TGGGCAATCT GAGTTTAACC GGTTCCCGTA CCGACTGGCG TAATCGCCTC
GGTCATGATG ACAGCTACGG ACTGAGTTGG GGAACCTCTA TCGGAGGGGG CTCGCTGTCA
TTGAACTGGA ATCAAAACAG AACGCTGTGG CGCAATGGCG CGCACCGTAA AGAGAACATA
ACCAGCCTGT GGTTCAGTAT GCCATTAAGC CGCTGGACGG GGAATAATGT AAGTGCTAGT
TGGCAGATGA CTTCACCATC ACACGGTGGT CAGACGCAAC AAGTGGGGGT CAACGGAGAG
GCATTCAGTC AGCAACTGGA TTGGGAGGTG CGTCAGAGTT ACCGTGCCGA TGCCCCGCCA
GGTGGTGGTA ATAACAGCGC ATTGCACTTG GCATGGAATG GGGCTTACGG CCTGTTAGGT
GGTGACTATA GCTACAGCCG GGCGATGCGC CAGATGGGAG TCAATATCGC GGGAGGTATA
GTTATCCACC ATCATGGTGT GACGCTGGGG CAACCTTTGC AAGGCTCAGT GGCGCTGGTT
GAAGCGCCAG GGGCCTCGGG GGTGCCAGTT GGCGGCTGGC TTGGCGTTAA GACGGATTTT
CGTGGCGACA CTACAGTGGG CAACCTGAGC GTCTATCAGG AGAATACAGT CAGCCTCGAT
CCGTCGCGAC TACCGGATGA CGCAGAGGTC ACACAAACCG ATGTGCGCGT GGTGCCAACC
GAAGGGGCGG TGGTGGAAGC GAAGTTTCAC ACTCGCATCG GGGCCAGGGC ACTGATGACG
CTGAAACGGG AAGATGGTAG CGCCATTCCT TTCGGGGCGC AGGTTACAGT CAATGGGCAG
GATGGCAGTG CTGCTCTGGT GGATACTGAT AGCCAGGTTT ATCTCACTGG TCTGGCGGAT
AAGGGCGAAC TGACGGTGAA ATGGGGAGCA CAGCAATGTC GGGTTAACTA CCAGCTACCT
GCCCACAAGG GAATCGCGGG CTTGTATCAA ATGAGCGGTC TCTGCAGATA G
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| Protein sequence | MKFKHPALLL FIAGVVHCAN AHTYTFDASM LGDAAKGVDM SLFNQGVQQP GTYRVDVMVD
GKRVDTRDVV FKLEKDGQGT PFLASCLTVS QLSRYGVKTE DYPQLWKAAK TPDECADLSA
IPQAKAVLDV NNQQLQLSIP QVALRTKFKG IAPEDLWDDG IPAFLMNYSA RTTQTDYKMD
MVGRDNSSWV QLQPGINIGV WRVRNATSWQ RSSQLSGKWQ AAYTYAERGL YSLKSRLTLG
QKTSQGEIFD SVPFTGVMLA SDDNMVPYSE RQFAPVVRGI ARTQARVEVK QNGYTIYNTT
VAPGPFALRD LSVTDSSGDL HVTVWEADGS TQMFVVPYQT PAIALHQGYL KYSLLAGRYR
SSDSATDKAQ IAQATLMYGL PWNLTAYGGI QSATHYQAAS LGLGGSLGRW GSLSVDGSDT
HSQRQGEAVQ QGASWRLRYS NQLTATGTNF FLTRWQYASQ GYNTLSDVLD SYRHDGNRLW
SWRDNLQPSS RTTLMLSQSW GRHLGNLSLT GSRTDWRNRL GHDDSYGLSW GTSIGGGSLS
LNWNQNRTLW RNGAHRKENI TSLWFSMPLS RWTGNNVSAS WQMTSPSHGG QTQQVGVNGE
AFSQQLDWEV RQSYRADAPP GGGNNSALHL AWNGAYGLLG GDYSYSRAMR QMGVNIAGGI
VIHHHGVTLG QPLQGSVALV EAPGASGVPV GGWLGVKTDF RGDTTVGNLS VYQENTVSLD
PSRLPDDAEV TQTDVRVVPT EGAVVEAKFH TRIGARALMT LKREDGSAIP FGAQVTVNGQ
DGSAALVDTD SQVYLTGLAD KGELTVKWGA QQCRVNYQLP AHKGIAGLYQ MSGLCR
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