Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0308 |
Symbol | |
ID | 6484920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 323291 |
End bp | 324595 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642735741 |
Product | hypothetical protein |
Protein accession | YP_002039516 |
Protein GI | 194443139 |
COG category | [N] Cell motility [S] Function unknown |
COG ID | [COG1360] Flagellar motor protein [COG3455] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family [TIGR03350] type VI secretion system OmpA/MotB family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.677173 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.0357421 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGACA GTACCCTGAC GCCGCCAGCG GCGGACATGA TGTCCTTTTT GTCCACCACG CCGGAGCATA AGGACAGTGA ATATGAAACG CCGGTACACA CCAGCCAGCG CACGGAACTC AATGTCATCG TTGAAGACGG TCCGGACAGC AAACTCCGGC TGGCTGAAAT CAGCGCGGCG GCTAACCCGT TGCTCGCCGC TGCCCGGCCT TTATTGTGCG CTCTCGCAGC CATGCCCGCT AAACTGGATG CGGCCCTGGT AGAGCCTTAC CGTAATCTGT TGGTACGCGA GATGCATCTG TACCAGACAT TATGCGATCA GGCGAACCTG CGGCGCGAGC ACGTACTGGC GGTACGTTAC TGCCTGTGTA CGGCGCTTGA TGAAGCCGCC AATAACACAA CCTGGGGACG GCGCGGCGTC TGGGCCGGAA AAAGCCTGCT GGTAACATTT CATGGTGAAA GCGAAGGCGG GATAAAACTT TTCCAGATCA TCGGGCGTCT GGCGGCCAGC TTCCAGGAGC ATGGCAACGT ACTGGAGGTT ATCTACCACC TGCTGGGGTT GGGATTTGAA GGCCGCTACA GCGTGCAGCC AGACGGGCGT AAGCAACTGG ACAATATTCG CCAGCAACTG CTGACACAGC TTTCACAGCG TCGCGATCCG GTTATGCCCG CGCTCTCGCC TGACTTTCAG GGGGCGATAA GCGGACGACT GCGGCGGATG CGCCGGGTGC CGGTCTGGCT GAGCGCCGGG ATAGCCCTGT TGGCGATGCT GACGCTGTTT GGCCTTTACA GCCACCGGAT GGATGTGCAG ACCGTCACCG TACAACAGCA TATTGATGCG ATTGGTATAA AACTGCCGCC GCCGCCCGTG CCGGTTCATA AGCTGCGGCT GAAAATCCTG CTGGCAAACG AAATCGCCCG TGGCCTGCTG ACCGTGGACG AAGATGACCA GCACAGTAGG GTGGTCTTCC GTGGCGACGC CATGTTTGTG CCGGGACAGA AAACGGTGAG TGACGCAATC CGGCCAGTGA TTAACAAAGC GGCGCGGGAA ATCGCCCGCG TGGGCGGCGC AGTCACTATA ACGGGTCACA CTGACAGCCA GCCCATTCAT TCGGCTGAAT TCCCATCCAA CCTGGTGCTG TCGGAAAAAC GGGCGGCGGA AGTTGCGGCG TTGCTGACCT CCGGCGGCGT ACCTGCCGGA CGGGTACATA TCGTCGGCAA GGGCGATACG GTGCCGGTGG CGGATAACGG CAGTAAAGCC GGGCGGGCGA AAAACCGTCG GGTGGAAATT CTGGTAGTGG AGTGA
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Protein sequence | MTDSTLTPPA ADMMSFLSTT PEHKDSEYET PVHTSQRTEL NVIVEDGPDS KLRLAEISAA ANPLLAAARP LLCALAAMPA KLDAALVEPY RNLLVREMHL YQTLCDQANL RREHVLAVRY CLCTALDEAA NNTTWGRRGV WAGKSLLVTF HGESEGGIKL FQIIGRLAAS FQEHGNVLEV IYHLLGLGFE GRYSVQPDGR KQLDNIRQQL LTQLSQRRDP VMPALSPDFQ GAISGRLRRM RRVPVWLSAG IALLAMLTLF GLYSHRMDVQ TVTVQQHIDA IGIKLPPPPV PVHKLRLKIL LANEIARGLL TVDEDDQHSR VVFRGDAMFV PGQKTVSDAI RPVINKAARE IARVGGAVTI TGHTDSQPIH SAEFPSNLVL SEKRAAEVAA LLTSGGVPAG RVHIVGKGDT VPVADNGSKA GRAKNRRVEI LVVE
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